Salvelinus namaycush (lake trout): 120063721
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Entry
120063721 CDS
T07522
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120063721
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
DUF5343
Glyco_transf_99
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
120063721
NCBI-ProteinID:
XP_038869944
UniProt:
A0A8U1F5I8
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Position
Sna19:5861603..5875283
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AA seq
629 aa
AA seq
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MDSPMCLVKNADGELRVEPEAINYLMGLKQKVVVVSVVGLYRTGKSYLMNKLAQKRSGFA
LGATIQSKTKGIWMWCVPHPEKTDHTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTL
VYNSQGTINNDAVEKLQYVNELTEMIKVKSSTDNEEEGEGTQFAQFFPNFVWTVRDFTLQ
LEIDGREITPDEYLENSLQLKKGYGKKISEYNVPRECIRNFFPSRKCFVFPSPTTPDNMH
RLDSMDEAELSESFREVADTFCRFIFQESRMKTVIGGHTLTGEMLGHLVTTYVETIAKGN
VPCLENAVLAMAKIENQAAVDEGLAVYQKGMEDVKALFPVDINQLSENHLRSETQATQAF
MKRSFKDENGEFLKALAEAIGNHYADLFKQNNDASEKKCKALLENLSAPMDQGMKEGTYA
TPGGYVLYCNHHDNIVAQYRAEPNKGVRAEEVLEQFLKGKSAESNSILQADKQLTENEKK
IQAEKMKTAELEQEKAALNEQKAEMERTIENIGRGQEKYLKEMKEKMEEERKQQQQEFNR
TLDRRMQEQKDLLEMGHKEKAELMRQEIEEIKKNNQLERDANTQNQKALLDDYKQQAEEQ
NKKMEALMSALNNKTQAPVQVVERLCIVM
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atggactccccaatgtgcctcgttaaaaacgccgacggagaacttcgcgtagaaccagag
gccatcaactacctgatgggactgaaacagaaagtcgtagttgtgtcggtggtcgggctg
tatcgcaccggaaagtcctacctcatgaacaagctggctcagaagagaagtggttttgcc
cttggagccaccatccagtccaagactaagggcatctggatgtggtgtgtccctcatcct
gaaaaaacagaccacaccctggtgctgctggatacagaggggctgggggacgtggagaag
ggggattctaagaatgatgcctggatcttctccctggccattctgttaagcagtactctg
gtctacaacagtcaagggaccatcaacaatgatgctgtggagaagcttcaatatgtgaac
gagctgacagagatgatcaaggtgaagtcttccactgacaatgaggaggaaggagagggc
acccagtttgcgcagttcttccctaattttgtgtggaccgtcagagatttcactctacag
ctcgagatcgacggcagagaaatcactccagacgagtatctggagaattccctgcaactc
aaaaaaggttatggtaaaaagatcagtgaatacaacgttccacgagagtgcatccggaac
ttcttcccctcacgcaagtgttttgtgttcccctcccctacaactcctgacaacatgcac
cgactggactccatggacgaggctgagctttctgaaagcttcagagaggtcgcagatact
ttctgccgcttcattttccaggagagccgtatgaagactgttatagggggacacacattg
accggagagatgctggggcacctggtcaccacctatgtggagaccatagccaaaggcaat
gtgccctgtctggagaatgcagtgctggccatggctaaaattgagaaccaggctgctgtg
gatgagggcctggcggtgtaccagaagggaatggaggatgtgaaggccttattcccggtg
gacatcaatcagctgtcagagaaccaccttcgctcagagacccaggccacgcaggcgttt
atgaagcgatccttcaaagacgaaaatggggaattcttgaaagctcttgcggaggccatt
ggcaaccactacgccgaccttttcaaacaaaacaacgatgcctcagagaagaagtgcaag
gcccttctggagaatctgtctgctccgatggatcaggggatgaaggaggggacgtacgcc
acaccgggaggctatgttctttactgcaatcaccatgacaacatagtggcacagtaccgg
gccgagcccaacaaaggagtcagggctgaggaggttctggagcagttcctgaagggaaag
agtgcagagtccaactccatcctgcaagctgacaaacaactgactgaaaatgagaaaaaa
atccaagctgagaagatgaaaacagctgagctggagcaagagaaggcagcattgaatgag
caaaaagcagagatggagcgcaccattgagaacattggcaggggccaggagaagtacttg
aaggagatgaaagagaagatggaggaggagaggaagcaacagcagcaggagttcaacagg
accctggaccgcaggatgcaggagcagaaagatctcctggagatgggccataaggagaag
gctgagctaatgaggcaagagatcgaggagataaagaagaataatcaattggaaagggac
gccaatacccagaatcagaaggctctgctggatgactacaagcagcaggctgaggaacag
aacaaaaagatggaagcgttaatgtcagcgctcaacaataaaacacaggcccccgtacaa
gttgttgaacgactctgtattgtaatgtga
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