Salvelinus namaycush (lake trout): 120063727
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Entry
120063727 CDS
T07522
Name
(RefSeq) homeobox protein Hox-D3a-like
KO
K09303
homeobox protein HoxA/B/D3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120063727
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
120063727
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GFIT
Motif
Pfam:
DUF4074
Homeodomain
CDC27
Homeobox_KN
DUF7255
Motif
Other DBs
NCBI-GeneID:
120063727
NCBI-ProteinID:
XP_038869950
UniProt:
A0A8U1F5J4
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Position
Sna19:complement(9741720..9743553)
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AA seq
399 aa
AA seq
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MQKATFYDNSGVFGSYSYAKSESYSYGPSHQPYSTSNLESDYQGPVCPIQTPTVRPPTHK
DNTMNGNNTRSSSSQGNSQQPSIGEQPHAPPLSASSPNSSNTSSQKKKSPSNNDSNTATP
VTNKQIFPWMKETRSNAKPKSNSSNNNNCATAEGESCDEKSPPGPASKRVRTAYTSAQLV
ELEKEFHFNRYLCRPRRVEMANLLNLTERQIKIWFQNRRMKYKKDQKAKGIMHSPIGHSP
DRSPPLSGPNHIGYSVNINCISYDAPSPPSFSKPQQNMYGLAAYTAPLGGCIPQQKRYPG
SEYEHHSMQGNGGFANANLQGSPVYVGGNFVDSMPASGPMFNLGHLPHPSSASVDYSCAA
QIPGNHHHGPCDPHPTYTDLSSHHASQGRIQEAPKLTHL
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaagctactttctacgataattctggagtctttggaagctactcttacgccaaa
tccgagtcgtatagttatggccccagtcaccagccctactccacttctaaccttgagagt
gattatcagggtccagtttgtccaatacaaaccccaactgtacggccaccaactcataaa
gacaataccatgaatggcaacaacacgagatccagtagcagccaaggaaacagccaacag
ccgagtattggtgaacagccgcatgcacctccactgtcggcctcttcgcctaactccagc
aacacttcatctcagaagaagaaatctccctcaaacaatgattctaatactgccacccca
gtcactaacaaacaaatattcccatggatgaaggagacgcgatcgaacgccaaaccgaaa
agcaacagcagcaacaacaacaattgcgcaaccgcagaaggtgagtcctgcgatgaaaaa
agcccacctggtccagcctccaaacgggtccgaactgcttacaccagtgcacaacttgta
gaacttgagaaggagttccatttcaaccggtacctgtgtcgtccccgaagagtggagatg
gctaatttattgaatctcactgagcgccaaataaagatctggtttcaaaacagaaggatg
aaatacaaaaaggatcagaaggctaaggggataatgcactctcccatcggacactccccg
gacagaagccctccattaagtggcccaaatcacatcggatattctgtcaatataaactgt
atcagctatgacgcgccgtcgcccccttcattctccaaaccccagcaaaacatgtacggc
ttggcagcttacacggcaccattaggtggctgtataccgcaacagaaaaggtatccgggc
tctgaatacgagcaccacagcatgcaaggcaatggtggctttgccaacgctaatttgcaa
ggcagtccggtgtacgttggggggaatttcgttgattccatgccagcctcgggtcccatg
ttcaacctcggccatctcccccatccctcatccgccagcgtggactacagctgtgccgct
cagattccaggcaaccaccaccatggaccctgtgacccccatcccacatatacagacctc
agctctcaccacgcgtctcagggaaggattcaggaagcgcctaaactaacgcatttgtaa
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