Salvelinus namaycush (lake trout): 120063935
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Entry
120063935 CDS
T07522
Symbol
lcmt2
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA wybutosine-synthesizing protein 4
KO
K15451
tRNA wybutosine-synthesizing protein 4 [EC:
2.1.1.290
2.3.1.231
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snh03016
]
120063935 (lcmt2)
Enzymes [BR:
snh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.290 tRNAPhe [7-(3-amino-3-carboxypropyl)wyosine37-O]-methyltransferase
120063935 (lcmt2)
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.231 tRNAPhe {7-[3-amino-3-(methoxycarbonyl)propyl]wyosine37-N}-methoxycarbonyltransferase
120063935 (lcmt2)
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120063935 (lcmt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LCM
Kelch_KLHDC2_KLHL20_DRC7
Motif
Other DBs
NCBI-GeneID:
120063935
NCBI-ProteinID:
XP_038870172
UniProt:
A0A8U1F5L6
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Position
Sna19:22364143..22374246
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AA seq
402 aa
AA seq
DB search
MNSIVTYAFLLSSVGEGSVQCNGDCEVSAVAQGYFLDDYLKQFVFKEFRRAPLINRAYYV
RWRAVDHCVKPFLWLTESCPRRQLSLVLSLGAGFDSLYFRLGAEGTQXGVVVFELDFPDV
AQCKASVINNNTQLNEVLDTLSSSPTAYDVIGWAARFLPQSLFVMYEQIRPHDPFGRVMQ
DHFLKLNSTLHVLRDYPETTVQTHRFQDKAYEGTLFRVSYDPCDLPDPVAPDNQASLRLP
LKEMSCTGNLPQPRRRHTATILRQEGQKFLFVFEGQNEAEDALYFDDQRWTEGTAPEPRF
SNSACASKGGVVICGGLGRGSVPLRDTGLLLDLTTGGSVELILDTESVPWPXMLHSFCSA
LLDSNDSDGSTMMALIGGGGNCFAFGTHHNPHPVTVDLKLVL
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcatcgtcacgtacgcattcctgttgtccagtgtgggtgagggcagtgtgcag
tgcaatggcgattgtgaggtgtctgctgtagctcagggttacttcctggatgactacctg
aagcagtttgtgtttaaggagtttaggagagcccctctcatcaacagggcttactatgta
cgctggagagctgtagaccactgtgtcaagccgtttctgtggctgacagaaagctgcccc
aggagacagcttagcctggtgttgtctctgggagcggggtttgactccctgtatttccgt
ctgggcgcagaggggactcagtagggggtggtggtgtttgagctggacttcccagatgtt
gcccagtgcaaggcttctgttatcaataacaacactcaactcaatgaggtgctggatacc
ctttcatcctcacccacagcgtatgatgtgattggctgggctgccaggttcctcccccag
tctctgtttgtgatgtacgagcagatccgcccccacgatccctttggtcgagtcatgcag
gaccacttcctgaagctcaactcaaccttgcacgtgctcagagactacccagaaacaact
gtacagacacacaggttccaggacaaggcatatgaaggaacccttttcagagtgagctat
gacccttgtgacctgcctgacccagttgcacctgacaaccaggcctcattgaggctcccc
ttgaaggagatgagctgcactggcaacctgcctcaaccaagacggaggcacactgcgacc
atactgaggcaggaaggtcagaagttcctgtttgtgtttgaaggacagaacgaggctgag
gatgcactgtattttgatgaccagcgttggaccgagggcaccgcgcctgagcctcgcttc
tctaattcagcctgtgcatctaaaggaggggtggtgatctgtggaggtctgggtagagga
agtgttccactgagggatacagggttgctgttagacttgaccacagggggcagtgtggag
ctcatcctggacactgagtctgtaccctggcctnncatgctgcactccttctgctcggcg
ctcctggactctaacgactctgacgggtcaacaatgatggctctgattggtggaggagga
aactgcttcgcctttgggactcatcacaaccctcaccctgtcactgtggacctcaagctt
gttctataa
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