Salvelinus namaycush (lake trout): 120063950
Help
Entry
120063950 CDS
T07522
Name
(RefSeq) semaphorin-5B-like
KO
K06841
semaphorin 5
Organism
snh
Salvelinus namaycush (lake trout)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sema
TSP_1
TSP1_2
TSP1_spondin
PSI
TSP1_ADAMTS
TSP1_CFP_C
Motif
Other DBs
NCBI-GeneID:
120063950
NCBI-ProteinID:
XP_038870187
UniProt:
A0A8U1F5M4
LinkDB
All DBs
Position
19:complement(24930045..25111432)
Genome browser
AA seq
1046 aa
AA seq
DB search
MAAQTALSPWISIFSHPGVRDYSQLTLDLTRNELIVGARNFLFRLSLNNVSLIQATEWIP
DDDTRRSCQSKGKTEVECQNYLRVLLVNKTEVITCGTNAFQPLCITREVGNMSSVLDRVN
GVARCPYDPRHNSTAVVTESGELFAATVIDFSGRDPVIYRSLGGMPPLRTAQYNSKWLNE
PHFISAYDVGLFTFFFLRENAVEHDCGKTVYSRVARVCKNDIGGRFLLEDTWTTFMKARL
NCSRSGEIPFYYNELQSTFYLPEQDLIYGIFTTNVNSIAASAVCAFNLSSITQAFNGPFR
SQENPRSTWLPTPNPIPNFQCGTIDDDGGPNDGLTERSLQDAQRLYLMNDVVQPVSVDPL
VMQDDVRFSRLVVDIVQGHDTLYHVMYIGTEYGTILKALATTNKSLQGCYLEEIQLLPPG
VREPILSLQILHSDRSLFVGLNNRVLKIPLERCSNYKTETLCLEARDPYCGWDRKQRRCT
TLEDSSNMSQWSQNITVCPLRNQTTNGGFGPWTTWQTCSNDDGDGTSSCLCRSRACDNPS
ARCGGRNCEGSTIEVSNCSRNGGWTPWSSWGQCSTTCGTGFEMRQRSCNNPSPRHGGRVC
VGPVRDERFCNEGVSCPQPIFWSLWGGWAKCSAECGGGVHSRVRSCENGNSCPGCALEYK
ACNLEACPEVKRNTPWTPWMPVNVTLGGARQEQRMRYMCRAQLADPHELQIGRRKVETRF
CPNDGMATCETDTLVEDLLRTPVVRVAGSGWSSWETWSACSQDCAKGYRTRKRTCATPEG
KVAPPACRGSPVEYQDCNSQACPVSGAWSCWSSWSQCSVPCGGGHYQRTRSCNNPSPVNG
GDICIGLHTEEALCNTHTCDGGWMAWSLWSACDDVGLQVRSRVCGAQGSAPCVGNSTEHR
DCNEIPVILPASGFDKDQQCRAFTSLHLIATGVSCFLGAGLLSFLVYVYCQRFHKPSQES
AVIHPTTPNHLNYKGNTTPKNEKYTPMEFKTLNKNNLLPDERSNFYPTPLQQTNVYTTTY
YPTALSKYDYNRPDSSPSPCRTYNHS
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atggctgcacagaccgccctgagtccttggatctctattttctcccacccgggcgtgaga
gactactctcaactgacccttgatctgaccaggaatgaactgatagtgggtgcaagaaat
ttcctcttcagattgagtctcaacaacgtgtctctcatccaggcaacggaatggattcca
gatgacgacaccaggaggtcctgtcagagcaaagggaagactgaggtagagtgtcagaac
tacctccgtgtgctactggtcaataagactgaggtcatcacctgtggaaccaacgccttc
cagcccctctgtatcacccgggaggtggggaacatgtccagcgtgttggatcgtgtgaac
ggcgtggcacggtgcccgtatgaccctcgccataactccacggcggtggtgacggagagt
ggtgagctgttcgccgccactgtcatagacttttcgggtcgcgaccccgtcatctaccgg
agcctaggaggcatgccacccctccggactgcccagtacaactccaagtggctcaacgaa
ccccatttcatctcagcgtacgatgtgggtctcttcacctttttctttctgcgtgagaac
gccgtggaacacgactgtgggaagactgtctactcacgggtggcccgagtctgtaagaac
gacatcgggggacggttcctactggaggacacctggaccaccttcatgaaggccaggctg
aactgctcgcgctcaggagagatccccttctactataacgagctgcagagcaccttctat
ctgcctgaacaagacctcatctatgggatattcaccaccaacgtgaacagtatagcagca
tctgcagtgtgtgcatttaaccttagctccatcacccaggccttcaacgggcccttccgt
tcccaggagaacccccgctctacctggctgcccaccccaaaccccatccccaacttccag
tgtggaaccatagatgacgacggcggtcctaacgatggtctgacggagcgcagcctccag
gacgcccagcggctgtaccttatgaacgacgtggtgcagcccgtctctgtggaccccttg
gtcatgcaggatgatgtgcgcttctccaggctggtagtggacatcgtacagggtcacgac
accctctaccacgtcatgtacatcggcacagaatacggcaccatcctgaaggccctggcc
accaccaataagagccttcaggggtgttacctggaggagatccagctcctcccccctggg
gtgcgggagccaatcctgagcctgcagatccttcacagtgataggtcactgtttgtagga
ctcaacaacagagttctgaagattccattggagagatgctccaactacaagactgagacg
ctatgcctggaggcacgggacccctactgtggctgggacagaaaacagagacgctgcacc
actctagaggacagctccaacatgagccagtggagtcagaacatcactgtgtgtccgctg
aggaaccagaccaccaatggcggctttggaccctggacgacgtggcaaacatgcagcaat
gacgatggcgacggcaccagctcctgtctgtgtcgctccagggcgtgtgacaatccctct
gctcgctgtggtgggaggaactgtgaggggtccaccatcgaagtctccaactgctcgaga
aacggaggatggacaccatggtcgtcatggggacagtgcagcaccacctgtggaacaggg
tttgagatgcgccagcgctcctgcaacaacccctcgccccgacatgggggacgtgtgtgt
gtgggcccggtcagggacgagaggttctgtaacgagggtgtgtcgtgtccccagcctatc
ttctggtccctatggggtggctgggctaagtgcagtgcagagtgtggaggaggggtccac
tccagggtcagaagctgtgagaacgggaacagctgcccaggctgcgcattggaatacaag
gcgtgtaacctggaggcgtgtccagaggtgaagaggaacaccccttggaccccgtggatg
cctgtcaacgtgacgctgggcggagcacgccaagagcagaggatgcgctacatgtgccgc
gcccagctggcagacccccacgagctgcagattggacgacgcaaagtagagacccgcttc
tgccccaacgacggcatggccacctgcgagactgacactctggtggaggacctcctgagg
acccctgtggtacgagtggcgggctccggctggtcgtcatgggagacgtggtccgcctgc
tcccaggactgtgccaaagggtaccgtacccgcaagcgtacctgtgccacgccagagggc
aaggttgcccccccagcctgcaggggttcgcccgtagagtaccaagactgcaactctcag
gcctgcccagtgagtggagcctggtcctgttggtcgtcgtggtctcagtgttcggtaccc
tgtggtggagggcactatcagcgtacccgatcctgtaacaatcccagccctgtcaacgga
ggagatatctgtattggcctacacactgaggaagcgctgtgcaacacacacacctgtgac
ggtggctggatggcctggtctctgtggtcagcatgtgatgacgtagggctgcaggtacgc
agccgggtctgtggggctcaaggctccgccccctgtgtgggaaacagcactgagcacagg
gactgcaacgagattccagtgattctccctgcgtctggctttgataaggaccagcaatgc
agagcattcacctctctgcacctgatagccacaggcgtgtcctgtttcctgggggcgggc
cttctgtccttcctggtctatgtgtactgccagcgcttccacaagccctcgcaggagtct
gccgtcatacacccaaccacacccaaccacctcaactacaaaggcaacaccacaccaaag
aacgagaagtacacgcccatggagttcaagactctgaacaagaacaacctgctcccagac
gagaggtctaacttctacccaacgcccctgcagcaaactaatgtttacactaccacctac
taccccacagcgctgagcaaatatgactacaacaggcctgactcctccccttccccttgc
aggacctataaccacagctaa
DBGET
integrated database retrieval system