Salvelinus namaycush (lake trout): 120063982
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Entry
120063982 CDS
T07522
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b
KO
K09364
POU domain transcription factor, class 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120063982 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120063982 (pou2f1b)
03021 Transcription machinery [BR:
snh03021
]
120063982 (pou2f1b)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
120063982 (pou2f1b)
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
120063982 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
120063982
NCBI-ProteinID:
XP_038870221
UniProt:
A0A8U1F5I5
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All DBs
Position
Sna19:complement(31005818..31016401)
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AA seq
670 aa
AA seq
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MESQSGDGNTGVQTNGLDFQRQTVQATNAITNAHAQALLQQLTLSPVQQQMFLQQAQAQL
LAAAMQQQSASQQSSTTGASISASAATPITQLPLSQPVQITSQLQQLQQQNLTMPQFVLV
QPGHHIATQLQPGQFIISQTPQGQQNMYTAQSFLQAQNLLTQLPQSQANLLQTQPSINLA
SQPATPSHTIAATPIQPLSHSQQTPPKRLDTPSLEEPSDLEELEQFAKTFKQRRIKLGFT
QGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEKWLNDAVCAENLSSDLAL
SSPCGLGSPGLGMEGLNRRRKKRTSIETNIRVALEKSFLEQNQKPTSEEITIIADQLNME
KEVIRVWFCNRRQKEKRINPPSSGHSITGTGSTPIKTIFTPTSPLVASTASLVTSNTPTT
LTLNPVMPLTSTSVSGLTLTGTTIGATTNTASVISTAPMVTAVTSSTSLSPSPMALQATA
AETGGTQEHMVVTQAPSSLATNLGTGQVMVAGPGLSAALQGAAQLPTSSSYAAMAGLNPG
LMASSQFTPGGALLSLAPGGLGGAINPAMLSNSTLATIQALASGGTLPITSLDGSGNLLF
ANTSAGSTPNLVQPLFLNPQNLSLLTSNPVSLVSAGAAGGGALQVTANHQVTTATVPVPA
STITTASKAQ
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggagagtcagagtggggacggaaacacaggagtccaaacgaatggactggactttcag
aggcagacggtgcaggccacaaacgcaatcaccaatgcacacgcacaagctctgctccaa
cagttgaccctgtctccagtgcagcagcagatgtttttgcagcaggcccaggcccagctc
ttggcagcagccatgcagcagcaatcagccagccagcagagcagcaccacgggggccagc
atctctgcctccgcagccacccccatcacacagctgcccctgtcccagcccgtccagatc
acctctcagttacagcagctgcagcagcagaacctaaccatgccccagtttgtcctggtt
caacctggccaccacatcgccacccagctgcaacctggccaattcatcatctcacagacg
ccgcagggccagcagaatatgtacacagcgcagagtttcctgcaagcccagaatcttcta
actcaactacctcaaagccaagccaacctcctgcagactcagccaagcatcaaccttgcc
tcacagccagcgactccgtcccacacgatagcagccacgcccatccagcccctgtcccac
agtcagcagaccccacccaaacgcctggacacacccagtctggaggagcccagcgacctg
gaggagctggaacagttcgctaagactttcaaacagagacgcatcaaactgggcttcaca
cagggggatgttggcctggcaatgggcaagctgtatggtaacgacttcagccagaccacc
atctcccgctttgaggccttgaacctcagctttaagaacatgtgcaagctgaagccactt
ctggagaagtggctcaacgatgctgtttgtgcagagaatctgtcgtctgacctggccctg
tccagcccttgcggcctgggctcccccggtctgggcatggaggggctcaaccgccgacgc
aagaagaggaccagcatcgagaccaacatccgcgtggccttagaaaagagctttctggag
cagaaccaaaaacctacctctgaggagatcaccataattgctgaccagctcaacatggag
aaggaggtgatccgggtgtggttctgtaaccgtcggcaaaaagagaagcggatcaacccc
cccagcagcggacacagcatcacagggacaggcagcacccccatcaaaaccatcttcacc
cccactagccccttggtggccagtacggcgagccttgtgaccagtaacacaccaaccaca
ctcactttaaacccagtgatgcctctcaccagcaccagcgtctccggcctgaccttgaca
ggcacgacgatcggagcgaccacaaacacggcatctgtcatctctacggcacccatggtt
accgcggtgaccagctccacctcgctaagcccctcccccatggccctccaggccacggcg
gcggagacgggtggaacgcaggagcacatggtggtcacgcaggcgccatcgtccctagca
accaatctggggacaggtcaggtgatggtggctggaccggggctgtcagcggccctgcaa
ggcgctgcccagttacccaccagttctagttacgccgccatggctgggcttaacccagga
ttgatggcatcctcgcagttcactcctgggggggccttgctgagcttagctccgggtggg
cttggaggggctataaaccccgccatgttgagcaacagcaccctggccaccatccaagct
ctggcatcgggtggcactctccccatcacctcgctggacgggagtggtaacctgctgttc
gctaacacctcggccggcagcactcccaacctggtgcaaccccttttcctgaacccccag
aacctgtccctgctcaccagcaaccccgtcagcctggtgtcggccggagccgccggggga
ggggccctgcaggtcacagccaaccaccaggtcaccacggcgaccgtcccagtgcccgcc
tccaccatcaccactgcctccaaggcccagtga
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integrated database retrieval system
