Salvelinus namaycush (lake trout): 120064005
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Entry
120064005 CDS
T07522
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
snh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
120064005
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120064005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120064005
Ion channels [BR:
snh04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120064005
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
120064005
NCBI-ProteinID:
XP_038870242
UniProt:
A0A8U1H6D2
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Position
Sna19:37200831..37215748
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AA seq
457 aa
AA seq
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MNRLLLVSHLLIILAGSAWSSDDETRLVKTLFTGYNKVVRPVAHFKDPVVVTVGLQLIQL
ISVDEVNQIVNSNVRLKQQWKDVNLQWNPEDYGGIKKIRVPSTDIWRPDLVLYNNADGDF
AIVHETKVLLEHTGMITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGNLVVVNP
DSDRPDLSNFMESGEWVMKDYRSWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIVNVII
PCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLF
TMVFVIASIIITVIVINTHHRSPSTHTMSPWVRKIFIDTIPNLMFFSTMKRPAKERQDKN
IYGADFDISDISGKPTPTAVTYQSPMTKNPDVRSAIEGVKYIAETMKSDEESNSAAEEWK
FVAMVLDHILLCVFMAVCIIGTLGVFAGRLIELSMTP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgtctacttttagtttctcatctccttatcattctagcaggctctgcctggagc
tctgatgatgaaacccgtctggtgaaaaccctgttcactggctacaacaaggtggtgcgt
cctgtcgctcacttcaaggacccagtggtggttacagttggtctgcagctcattcaactc
atcagtgtggatgaggtcaaccagattgtcaacagcaatgttcgactgaaacagcaatgg
aaggatgtgaacttgcaatggaatcctgaggattatggtggaatcaaaaagataagagtg
ccctccactgacatttggcgtcctgacctcgtgctctataacaatgctgacggtgacttt
gccatcgttcacgagaccaaagtgctgctggagcacactggcatgatcacgtggaacccc
cctgccatcttcaagagttactgtgagatcatcgtgctgcacttccccttcgacctgcag
aactgcagcatgaagcttggtacctggacctatgatggcaacctggttgtcgtcaatccc
gacagcgaccgtcctgacctgagtaacttcatggagagtggagagtgggtgatgaaggat
taccgcagctggaaacactgggtgtactatgcctgctgcccagacacaccctacctggac
atcacctaccacttcctgatgctgcggctgcccctctacttcatcgtcaacgtcatcatc
ccctgcatgctcttctcattcctcactggcctcgtcttctatctgcccactgactctggt
gagaagatgactctgagtatctctgtcctgctgtctctgactgtgtttctgctggtcatc
gttgagctcatcccctccacctccagtgctgtgccgctcatcgggaagtacatgctcttc
acaatggtcttcgtcattgcctccattatcatcactgtcatcgtcatcaacacccaccac
cgctcccccagcactcacaccatgtccccctgggttcgcaagattttcattgacacaatt
cccaacctcatgttcttctcaacaatgaagcgtcctgcaaaggagagacaggataaaaac
atctatggtgctgactttgacatctcagacatctcaggcaagcccacccctactgcagtc
acctaccagtcccccatgaccaagaacccagatgtacgcagtgctattgagggggttaaa
tacattgctgagaccatgaaatctgatgaggagtccaacagtgctgctgaagagtggaag
tttgtggccatggtgctggatcacattctgctgtgtgtgttcatggcagtgtgtatcatt
ggcaccctaggagtgttcgcaggccgtctcattgagctgagcatgacaccttag
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