Salvelinus namaycush (lake trout): 120064058
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Entry
120064058 CDS
T07522
Name
(RefSeq) tubulin alpha chain-like
KO
K07374
tubulin alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04145
Phagosome
snh04210
Apoptosis
snh04517
IgSF CAM signaling
snh04530
Tight junction
snh04540
Gap junction
snh04814
Motor proteins
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120064058
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120064058
09143 Cell growth and death
04210 Apoptosis
120064058
09144 Cellular community - eukaryotes
04530 Tight junction
120064058
04540 Gap junction
120064058
09142 Cell motility
04814 Motor proteins
120064058
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120064058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120064058
03036 Chromosome and associated proteins [BR:
snh03036
]
120064058
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120064058
04147 Exosome [BR:
snh04147
]
120064058
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120064058
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
120064058
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
120064058
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120064058
Exosomal proteins of other body fluids (saliva and urine)
120064058
Exosomal proteins of colorectal cancer cells
120064058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
120064058
NCBI-ProteinID:
XP_038870311
UniProt:
A0A8U1F5P6
LinkDB
All DBs
Position
Sna19:complement(2935409..2946829)
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQMGNTCWELYCLEHGIQPDGQMPSDKPTGNLDDSFTTFFSATGTGK
YVPRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNYARGHYTIGKEIIDSVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDFGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNVAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSFEEEEEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctctgttcacgtgggccaggctggagtccagatgggtaacacctgt
tgggagctgtactgcctggagcatgggatccagccggacggacagatgcccagtgacaag
cccacaggtaacctcgacgactccttcaccaccttcttcagcgccacgggcaccgggaag
tacgtgccacgcgccatcttcgtcgacctggaacccaccgttatcgatgaggtgaggaca
ggtacctatcgccagctgttccaccctgagcagctcatctcaggcaaggaagatgctgcc
aacaactacgcccgcggtcactacaccatcggcaaggagatcattgactccgtcctggac
aggatccgtaaactggctgaccagtgcactggtctccaaggtttcctggttttccacagc
ttcgggggaggcactggctctggtttcacctccctgctgatggaacgtctgtctgtcgac
ttcggcaagaagtctaagcttgagtttgccatctatccagctccccaggtgtctacagct
gtggtggagccctacaactctatcctgaccacccacaccaccctggagcactctgactgt
gccttcatggtggacaatgaggccatctatgacatctgtcgtaggaacctcgatattgag
cgtccctcatacaccaacctcaacaggctgatcagtcagatcgtctcctccatcactgcc
tccctgcgtttcgatggagccctgaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccctctggctacctatgccccagtcatatccgctgagaag
gcctatcacgagcagctgtcagtcgctgagatcaccaatgcctgcttcgaaccggccaat
cagatggtgaagtgtgaccctcgtcacggcaaatacatggcctgctgtctcctgtaccgt
ggcgacgttgttcccaaggatgtcaatgtagcgatcgctgccatcaaaaccaagaggagc
atccagtttgtggactggtgtcccactggcttcaaggtgggtatcaactaccagccccct
acggtggttcctggaggagacctggccaaggtccagagggccgtgtgcatgctgagtaac
accacagccatcgctgaggcctgggcacgtctggaccacaagtttgacctgatgtatgcc
aaaagagccttcgtgcactggtacgttggtgagggcatggaggagggagagttctctgag
gccagagaagacatggcagccctggagaaggattatgaagaggtgggcatcgactcgttt
gaggaggaggaagaaggagaagagtattaa
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