KEGG   Salvelinus namaycush (lake trout): 120064081
Entry
120064081         CDS       T07522                                 
Name
(RefSeq) WD repeat-containing protein 1-like
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:snh04990]
    120064081
Domain-containing proteins not elsewhere classified [BR:snh04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   120064081
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_TEP1_C eIF2A Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 NBCH_WD40 PEP5_VPS11_N WDR90_beta-prop_4th Beta-prop_SPT8 RMC1_N Beta-prop_NUP159_NUP214 PROPPIN Beta-prop_RIG_1st Beta-prop_SCAP Beta-prop_ELP1_1st Beta-prop_WDR11_1st DUF7165 WD40_RFWD3 DUF5711 Beta-prop_DCAF12 WD_LRWD1 HPS3_N PQQ
Other DBs
NCBI-GeneID: 120064081
NCBI-ProteinID: XP_038870356
UniProt: A0A8U1F5S8
LinkDB
Position
Sna2:45699489..45712120
AA seq 606 aa
MSYELKHVFASLPQMERGVAKVLGGDPKGNNFLYTNGKSVIIRNINNPAIADIYTEHPHQ
VTVAKYAPSGFYIASGDVSGKIRIWDTTQKEHLLKYEYQPFGGKIKDIAWTEDSKRIACV
GEGREKFGAVFLWDTGSSVGEISGHSKVINSVDIKQTRPYRLISGSDDNCGAFFEGPPFK
FKFSITDHSRFVNCVRFSPDGNRFCTAGADGQIFLYDGKTGEKICALGGAKAHEGGVYAV
SWSPDSSQLISASGDKTVKLWDVGTSTALTTFNMGADVMDQQLGCLWQKDHLLSVSLSGY
INYLDKSNPDRPLRTIKGHSKSIQSLTVHKNGGRSYIYSGSHDGHINYWDAETGENNDFS
GKGHSNLVTKMAVDDADQLVTCSMDDTVRFTSVTKKEYSASNLVKMDVQPKHVSVAAGGL
ALAVCIGQVVFLKDKKKVFTLDSLDYEPEAGAIHPGGSTAAVGGADGKVRLYSVQGNTLK
DEGKSVEAKGPVTDMAYSKDGAYLAVTDEKKVVTVFTVADNYSVKNDFYGHHAKVVTLAW
SPDNEHFASGGMDMMVYVWTVNDADKRLKIPDAHRLHHVSGLAWIDEHTLVTTSHDASVK
QWTLKF
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgtcatatgaattgaagcatgtatttgccagcctcccgcagatggaacgaggagtcgcc
aaagtcctaggtggcgatcccaaaggcaacaacttcctctataccaatggaaagagcgta
atcatcaggaacattaataaccctgccatagctgatatctacactgagcaccctcatcag
gttactgtcgccaagtacgcccccagtggcttctacattgcttctggagatgtgtctggt
aagatccgtatctgggacactacccagaaggaacacctgctgaagtatgagtaccagcct
ttcggggggaaaatcaaggacatcgcatggactgaggacagcaaaaggattgcttgtgtg
ggagagggacgtgagaagttcggggctgtgttcctgtgggacactggctcctctgtggga
gagatctcaggccactccaaagtcatcaacagcgtagatatcaagcagactcgcccctac
cgtctgatctccggaagcgatgacaattgtggagccttctttgagggaccacctttcaag
ttcaagttctcaatcacagaccacagcaggtttgtcaactgcgtacgtttctctccagac
gggaaccggttttgtacggctggcgctgacggtcagatcttcctgtacgacggaaagact
ggtgagaagatttgcgctctgggcggagccaaggcccacgagggaggagtctatgccgtg
agctggagccccgacagctcccagctcatctctgcctcgggcgacaagacggtgaagctt
tgggacgtaggcaccagcacggccctcaccaccttcaacatgggcgccgacgtcatggac
cagcagctgggctgcctgtggcagaaggaccacctgctcagcgtctccctgtctggttac
atcaactacctggacaaaagcaaccctgaccggccgctccgcaccatcaagggtcacagc
aaatccattcagtccttgacggttcacaaaaacggggggcgttcttacatctactcgggc
agccatgacgggcacatcaattactgggacgcggagaccggggagaacaacgacttctca
gggaagggccacagcaacctggtcaccaagatggctgtggacgatgctgaccagctggtg
acctgcagcatggacgacacggttcgcttcaccagcgtgaccaagaaagaatacagtgct
tccaacctggtaaagatggacgtccaacctaaacatgtgtcggtagcagcaggggggctc
gctttggctgtgtgcatcggacaggtggtgtttttgaaagacaagaagaaggtgttcacg
ctggacagtctggactacgagccggaagcaggagcaatccacccagggggcagcactgcg
gcagtgggcggggcagatggaaaggtccgcttgtattctgtccaaggcaacactctgaag
gacgaggggaagagcgtggaggccaaggggccagtcacagacatggcctactccaaagat
ggcgcctacctggccgtcactgacgagaagaaggtcgtcacagtcttcacagtggcagac
aattactcggtcaaaaatgatttttatggacaccacgcaaaagtggtcaccctggcctgg
tctcccgacaatgagcactttgccagtggtgggatggacatgatggtctatgtttggaca
gtgaatgacgcagacaagagactgaagatcccagatgcccacaggttgcaccatgtcagt
ggcctggcctggatagatgagcacactctagtgaccacctctcatgacgccagcgtcaag
cagtggactcttaaattctga

DBGET integrated database retrieval system