Salvelinus namaycush (lake trout): 120064095
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Entry
120064095 CDS
T07522
Symbol
ercc1
Name
(RefSeq) DNA excision repair protein ERCC-1
KO
K10849
DNA excision repair protein ERCC-1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03420
Nucleotide excision repair
snh03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120064095 (ercc1)
03460 Fanconi anemia pathway
120064095 (ercc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snh03400
]
120064095 (ercc1)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
120064095 (ercc1)
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Rad10
HHH_5
HHH
HHH_2
Motif
Other DBs
NCBI-GeneID:
120064095
NCBI-ProteinID:
XP_038870372
UniProt:
A0A8U1F5U3
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Position
Sna19:5801543..5808817
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AA seq
386 aa
AA seq
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MEKKRFNINLDDSAFTKERAPVKPLFQPSSKAGQSAAASSSSTTSETTAQPAPPSAGQPL
SYAEFIVQSKGHAPPRVPSAPQRVGVSRVAAGTGTGIDTETGSLKQGLSQGAQGGPDVLS
SSSSVGCERPQDQAQGTKDLGSGGPPGVTEGEGQRAGTEQKQGEGQGSEGSNILGHPKPV
GSGNSIIVSPRQRGNPILKFVRSVPWEFGEVVPDYVLGQTTCALFLSLRYHNLNPNYIHD
RLKLLGQTFILRVLLVLVDVKDPHHSLKELARICIMADCTLILSWSPEEAGRYLETYKSY
EKKPADLLKEHVEKDYLSKVTDCLTTVKSVNKTDSITLLSTFSSLEGIINAAKEDLVLCP
GLGPQKARRLYDVLHQPFLKAKKKDS
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaagaggtttaatatcaacctggacgactctgccttcacaaaagaaagagcc
ccggtgaaacccctgttccagccctcctctaaggcaggccagagtgcagcagcatcatca
tcatcaaccacctctgagaccacagctcagcctgcacccccgtctgctggccaaccacta
tcctacgcagagttcattgtccagagcaaaggccatgcacctccgagagtcccctcagct
ccacagagagtgggggtgtccagggtggctgcagggactgggaccgggatagatacagag
actggtagtttgaagcagggtctcagtcaaggagcacaaggtgggcctgatgtgctgtcg
tcgtcgtcctctgtggggtgtgagaggcctcaggaccaggcccaggggacaaaggatctg
ggttctggtggaccaccaggggttacagagggagaggggcagagggctgggactgagcag
aagcagggggagggtcaagggtcagagggcagcaacatcctaggtcatcctaaaccagtg
gggtctggtaatagtatcatagtcagccccagacagagaggaaaccccattctgaagttt
gtgaggagtgtgccttgggagtttggagaagtggtccctgactatgtccttggacagaca
acctgcgctctcttcctcagtctgaggtaccacaacctcaaccccaactacatccacgac
cgtctcaaactgttgggccagaccttcatcctcagggttctactggtgttagttgatgtg
aaagaccctcaccattctctgaaagagctggctcgtatctgcatcatggctgactgcact
ctcatcctgtcctggagtccagaggaggcggggcgttacctagagacgtacaagtcctat
gagaagaaaccagctgatctgctgaaggaacatgtggagaaagactacctgtcgaaggtg
acggactgtctgaccactgtgaagtctgtcaacaagactgactccatcactctgctgtca
accttctcttccttagaggggatcatcaatgcagctaaagaggacctggttctctgtcct
ggactgggaccacagaaggccaggcgtctctatgacgtgctacaccagcccttcctcaag
gccaagaagaaagacagctga
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