Salvelinus namaycush (lake trout): 120064106
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Entry
120064106 CDS
T07522
Name
(RefSeq) trafficking protein particle complex subunit 10-like
KO
K20307
trafficking protein particle complex subunit 10
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120064106
Membrane trafficking [BR:
snh04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
120064106
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
SNAP
TPR_12
TPR_7
TPR_19
Motif
Other DBs
NCBI-GeneID:
120064106
NCBI-ProteinID:
XP_038870385
UniProt:
A0A8U1F6E4
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Position
Sna19:complement(6650067..6681359)
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AA seq
1269 aa
AA seq
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MEPQEEKPIIYTMENKPIVTCAGDQALFTSLYTPLAQQLPREPMEWRRSYGRAPRTIHLE
ANFVQFKEELLPKEGNKALLTFPFLHIYWTDCCDIKVYKASVRDNMMRWQGNLRLHGSAD
WVIVVVETSDAKKKNKTNILPRSSLVDKIRNDFCNKQNDRCVVLSDPLKDSSRSQESWSA
FLLKLRTLLLMSFTQNLGRFEEDMRTLREKRNQPGWSFCDYFMVQEELAFVFEMLQQCED
ALVQYDELDALFTQYVLNFGAGDGANWLGSFCSPVKRWTGLLLRRPIDMEKRDGIQSGQA
SLLELRSYLFCRQCTLLIFLQRPWEVTQRALELLHNCVQELCLLEVSMLEGALDCWVFLS
CLEVLHRIEGCCDQAQLEANVSHTVGLWAYATDKLKSLGYMCGLVSEKGPLSLELNRTVD
LLAGLGDEKAETVHSLQSPYKKLKEALSSVEAFERHYLELSHAAVEMYRAIGRMRSAGLV
GKSLAEFYMRKGDPEQAESFLQNALRSYVSEGWSLLVTHTRKQMAECQKLQGKTETYLQT
SALLAGDANLTNEERIHFCQEILTFANQSTDSKAQKVTLSMSSFAQLKQLQFRPATATVH
SGTALQVELCLRSLMPVAVPLEQLAASVHLNLEQGETNGKTRGPQRRPYPETVLFPLGNS
SAMPPSAAGPSPELEEIQDCSPSDPRSLNSTGMVCKNTHLVMRRHDSSPSPDTPNLVSPV
PVVMDDGANMLMSGDVTLLPGNNSIVFSVPSQELGTYTLRQLCATVGQVQFILPHISPLV
HYEVYSQESQLTVEPLTDQLLAGLPQRAKVRLQTGHYTVKKGDALQLTNIDSMPILTSSS
CPATILNSTAERVDESVLFIQSSDKVTCISLPPTPPYHTLEFQLEVLCVIPSDPVRPENQ
RLTNGEIRHRPRSYNLPDNHMTAINQRMSIDCPWSIYSTPISLTFYIPFKAKHSLLSAGN
RKYIQVCLQNVSDVNFHLMDQRLTEKHRESSLELQSLNTKAQQLVYSKQSLYYVWDVRWK
ENMPLCLQCVFSASFSSASEEVSAFKPYHYAFQLERVTTLYSVRTEIMPAAGQQNCHSGS
LCGLEMSITRLAEPEDDEDDRGTEKKGQTETEEVCSTKLMYKVADGSSSWVVYGRSSGLV
SMPMDANANHRVQVELMPLFAGHLPFPDIEVFKYLPPSANSASQPDTDGCVENDTLSLLV
RPLDDQGDTASIRSQGTVHSVGSGEQQSRVLPMPRLEPFSPGQVFNHSQGCQVLVLPSTD
GHVLEINAT
NT seq
3810 nt
NT seq
+upstream
nt +downstream
nt
atggagcctcaagaggagaagcccattatatacacaatggagaacaagccgattgtgaca
tgcgctggggaccaggccttgttcacttctctctacaccccattggcccagcagcttccc
agggaaccaatggaatggaggaggtcgtatggacgagcaccaaggacgatccatttagag
gccaactttgtccagttcaaagaggaactcctccctaaagagggaaacaaagccctcctc
actttccccttcctccatatctactggacagactgctgtgacataaaggtgtacaaggcg
tcagtcagggacaacatgatgaggtggcagggcaacctgcggctccacgggtcagctgac
tgggtcatcgttgtcgtggagaccagcgacgccaagaagaagaacaagaccaacatcctg
cctcgctcctccttagtggacaagatccgcaacgacttctgtaacaagcagaatgaccgt
tgtgtggttctgtcagaccctctaaaggattcgtccaggtctcaggagtcgtggagtgcc
ttcctgctgaagctgaggactctactgctgatgtccttcactcagaacctgggacgcttc
gaggaggacatgcgcaccctccgggagaaacgcaatcagcccggctggagcttctgtgac
tacttcatggtacaggaggagttggcctttgtgtttgagatgctacagcagtgtgaggat
gccctggtccagtacgacgagctggacgcgctcttcactcagtatgttctcaacttcggg
gctggagacggggccaactggctgggttccttctgctccccggtgaagagatggactggc
ttgctcctgcggcgccccatagacatggagaagagagatgggatccagagcgggcaggct
agcctgctggagctacgcagctacctgttctgtcgtcagtgtaccctgctcatcttcctc
cagaggccctgggaggtgacacaaagagccctggagctgctgcataactgtgtccaggag
ctatgcctgctggaggtgtctatgctggagggtgcgttagactgctgggtcttcctcagc
tgcctggaggtgctgcaccgtatagaaggctgctgtgaccaggcccagctagaggctaat
gtctcccacactgtgggcctgtgggcctatgctactgacaagctgaagtctctgggctat
atgtgtggtctggtgtcagagaagggtccgctgtctctggagctgaaccgaactgtggac
ctgctggctggactgggggatgagaaggctgagactgtccacagcttgcagagcccttat
aaaaaactgaaggaggccctgtcttctgtggaggcatttgagagacattatcttgagttg
tcccatgctgctgtggagatgtacagggccattggcaggatgaggtcagcggggctcgtt
gggaagagcctggctgagttctacatgaggaagggtgatcctgagcaggcggagagcttc
ttgcagaatgctctgaggtcatacgtgtcagaggggtggagcctacttgtcactcacacc
aggaagcagatggccgagtgccagaaactgcaggggaagacagagacctacctgcagaca
agtgccttgttggcaggtgatgccaatctgaccaatgaggaaaggattcacttctgtcag
gagatcctgactttcgccaaccaatcaacagacagcaaggcccagaaggtgacgctcagt
atgagttctttcgcccagctcaagcagctgcagttccgcccggcaacagccacggtgcac
tctggcaccgccctgcaggtggagttgtgtctgcgcagcttgatgcctgtggccgtgcct
ctggagcagctggctgccagtgttcacttaaacctggagcagggagagactaacgggaag
accagggggccacagagacggccatacccagagacggtgcttttccccctgggtaactcc
tcagcgatgccaccctccgctgctggtccttctccggagctggaagagatccaggactgc
agcccctcggaccctcgtagcctcaactccaccggcatggtgtgtaagaacacacacctg
gtcatgcgtcgtcatgacagcagcccgtcaccggacacgcccaaccttgtcagcccagtt
cctgttgtcatggatgacggggcaaatatgctaatgagcggtgatgtcactctgctgccg
ggcaacaacagcattgtcttcagtgtaccaagtcaggagctgggtacctatacgttgcgt
cagctgtgtgccacagtgggccaggtccagtttatcctccctcacatctctcctctggtc
cactatgaggtctattctcaggagtcccagctcactgtggagcccctaacagaccagctg
ctggcaggcctcccccagagggcaaaggtcaggttgcagacaggtcactacactgtgaag
aagggagacgccctgcagctcactaacatagatagcatgcccatcctcacctcctcctcc
tgccctgctaccatcctcaacagcactgcagagcgtgtggatgagagtgttctgttcatc
cagtcgtctgacaaagtgacctgtatctctctacctcccacccctccctatcacaccctg
gagtttcagctggaggtactgtgtgtcatcccttctgacccagtccggcccgagaaccag
agactcacaaacggagagatacgccaccggccccggagctacaacctccccgataaccac
atgaccgccatcaaccagaggatgtctatagactgtccctggtccatctactccactcca
atatccctcaccttctacatcccctttaaggccaagcactcactactatcagcagggaac
aggaagtacatccaggtgtgcctgcagaacgtgtcagatgtgaactttcacctgatggac
cagaggctaacagagaaacatcgtgagtcctctctggagctgcagtccctcaacactaaa
gcacaacagttggtgtacagtaagcagagtctgtactacgtatgggatgtgaggtggaag
gaaaacatgccactctgtctacagtgtgtgttctctgccagcttctcttctgcttctgag
gaagtgtcagccttcaaaccctaccactacgcgtttcaactggagagagtgacaacactg
tacagtgtgaggacagagatcatgcctgcggctggtcaacaaaactgtcactctggctcc
ctctgtgggctggagatgtccatcacacgactggctgaacctgaggatgatgaggatgat
cgagggacagagaagaaagggcagacagagacagaggaggtctgctccaccaagctcatg
tataaagtggcagacggcagcagtagctgggtggtgtatggcagaagctcagggctggtg
tccatgccaatggatgctaatgccaaccacagggtacaggttgagttgatgcccctgttc
gctggccacctgccattccctgacatcgaggtgtttaagtacctacctcccagtgccaac
tccgccagccaacctgacacagacggctgtgtagaaaacgacaccctctccctgctggtc
cggcctctggacgaccagggggacacggccagcatccgtagccagggaactgtccactct
gtgggcagcggggagcagcagtccagggttctccccatgcctcgcctggagcccttcagc
ccgggacaggtgttcaaccacagccagggatgccaggtcctggtgctgccctctacggat
ggccacgttctagagatcaacgctacgtga
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