Salvelinus namaycush (lake trout): 120064168
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Entry
120064168 CDS
T07522
Name
(RefSeq) proline-rich protein 36-like
KO
K19553
homeobox protein TGIF2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120064168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120064168
Transcription factors [BR:
snh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
120064168
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
120064168
NCBI-ProteinID:
XP_038870483
UniProt:
A0A8U1H487
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Position
Sna2:complement(47133915..47143536)
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AA seq
545 aa
AA seq
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MSHERRIEPSSGKVKACNTLERKYRVNVWSGAHILQGTSTAVCFQTSHQQRMKPFKRALE
EERRREQELSAMTDSDPFEDDSSTLDLSGGGGGSGKRRRRGNLPKDAVQVLRCWLYEHRF
NAYPSEQEKLGLSDQTSLSVLQICNWFINARRRLLPDLLRKDGKDPTQFTISRRAGKGEC
RPATGGCGGGSSPESPTSVPSPALPPLRPSVIRPAPTLDLSLLGNTATAILLGAGYPSQE
GYCVKALMQQSLLRREAEENGSKVISASPTGGLFNTPPPTPPELCPSQDFSDLRLLVDAA
LQRAAEHESQRLLPEYQSRATTEATGGCIHSSSAMGLTTPPAQSQATFDSPREKSPANMA
VVSPVSVLIHVPVCSAPKLAMASVPAPNVPPRLAQVPVSTPFPTFVPAPTLSLVPASTPI
PTKPLLPAPSPVQTFAGAPTVSCVPTSVPAPSSTQVPTLTSVPTPAPPLAPAPPALTPFL
GLASLQPLSSSIPNSSVQRAQSMPSVWSVVHSDATVRQPVPVVQTPMAAVWGPQHTLRAV
SETVN
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatgaacgaagaattgaaccgtcgagcggcaaagtaaaagcgtgcaacaccttg
gaaagaaaatatcgcgtcaacgtttggtcgggggcacacattttacaaggaacttcgaca
gctgtgtgttttcaaacaagccatcaacaaagaatgaaacccttcaaacgagctctggaa
gaggagcggaggcgagagcaggagctgtcagccatgactgacagcgacccctttgaggat
gacagctccaccctcgacctgtctggagggggtgggggctcgggcaagcggcgtcgccgt
ggcaacctgcccaaggatgcggtgcaggtgctgcggtgctggctgtacgagcaccgcttc
aacgcctacccctcagagcaggagaaactcggattgtcagatcagaccagcctttctgtg
ctgcagatatgcaactggttcatcaatgcccgccgccgcctcctccctgacctgctccgc
aaggatggcaaagaccccacccagttcaccatctccaggcgggcggggaagggcgagtgc
cgcccagccactggaggatgtggcggaggtagttcccctgaaagccccacctcagtcccc
tctccagccctgccccctctcaggccctctgtcatccgaccagcccccacactggacctc
agcctcctgggaaatactgccactgccatccttttgggagctggctaccccagccaagag
ggctactgtgtcaaggccctgatgcagcagagtctcctgaggagggaggccgaggagaat
ggctccaaggttatcagcgccagccccactggcgggctattcaacacgccgccccccacg
cctccggagctgtgccccagccaggacttcagtgacctgaggttgctggtggatgcagct
ctccagagggccgccgagcacgagagtcagaggctgctcccggagtaccagagcagggcc
actacagaagccacaggtggctgcatccacagcagcagtgctatgggtctgaccactcca
ccggcacagagccaagctacctttgattcgcccagagagaagagtcctgcgaacatggct
gtggtgtccccagtttcagtcctaatccatgtcccagtctgctctgctcctaaactcgcc
atggcctctgtacctgctccaaatgtgcctccccgcctagcccaagtgccagtttcaacc
ccctttccaacctttgtcccagcaccaaccttatccctggttccagcttcaactccgatc
ccaaccaaaccccttctcccagccccaagccctgttcaaacctttgctggtgcaccaact
gtgtcctgtgtcccaacctcagtcccagctccaagctctacccaagtcccaaccctaacc
tctgtcccaaccccggccccacctttagccccagcaccaccagccctcaccccattcttg
ggcctggcttccctccagcccttgtcctcctccatccccaacagcagtgtccagagggcc
cagtcgatgcccagtgtgtggagtgtggtccacagcgatgctacagtccgacagcctgtc
cccgtggttcagactcccatggccgctgtgtgggggccacagcacaccttgcgcgccgtc
agcgaaacagtcaattag
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