Salvelinus namaycush (lake trout): 120064169
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Entry
120064169 CDS
T07522
Name
(RefSeq) BCL-6 corepressor-like isoform X1
KO
K23215
bcl-6 corepressor
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120064169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120064169
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
120064169
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
BCOR
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
120064169
NCBI-ProteinID:
XP_038870480
UniProt:
A0A8U1H6J4
LinkDB
All DBs
Position
Sna19:15869846..15942333
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AA seq
1945 aa
AA seq
DB search
MVDARLTPLATMGLDRNALMRDGLRHHGSVVYPGIRALSAEKPHEGSTTLPLSYNRDGLP
DLLYKPDISMDRSKPTNGYLDLYKSSPPSLHRGPEGLDRRGVGPGGEKPSELGLGGAGAG
AGGYLRLPWGLSRGLYPEAGLYPYMDSSKYAALSMYKAQFLNQPSPYLPQHLAYQSLCAS
QGGNMNPAAASAAERLYYMPPYPPSPISSSLVGSPMRIPAVSVAPTSMVHCQEKGLSVGS
RVHHEGSPFGQQLHQPPPPPQHLLPPHTDRDRDRPPSRSNKPSRPPSNKGASNSSGSSSS
SGGSSGGSNTNSSSLPIDSSPRASSRLPQPAPPLPPPHIDSTMDLQRAVSRIVPLSSSSC
SSSSSQTIPHSFYVSSMAPEHPSPAWPSPHKPRPRDGVSDHRAGGCEKRPSQCPSKPSSE
RPAPLNQPPTTKDPADPKPLDLSGRLLELGLPPNSFPVKMEALGSPGPRYGPPPSRELLK
ETLSLSPPSLPSHSHSVVSSTSSKAPERPEMISTLHSSWVVPTLTPTYTIGSTHAHPHPP
AMSPSPRPSPDTQGKGSSPSVIKHKALERVLPQPQQRSPSCPRVGETNTTPIPSNLNPPS
TIPLSPKPNNDWPKHSPSQSESSPMAGHLRNSTEKPPKAPKRAETSQEVSPYNKRQCLEN
ANGHPPSHLYLPQSEAYLPHSMVYANRYLHYSVPDGMALHSLPLPGKGPAYPPPILLGSN
SLYPSHLAAKHPLPYHSHAGEYLTYNSQEMAHPLMHTHTDSKALERADQGPKSRGQGQDK
PRGLKEDFGVSHRGRSDVETGEGSHVKRNKDAGEWGGSQPRPLSSSSTSIPSKDRIVCID
LVHSDTDGESTPAANQPPLPVIVPITRGNQHQCGHGDQSMREVEREPEHQLHHHHLHHHP
SPSSTLRTTHTDRQPETPCMRPRPLQETGCPGVASSPPQGSPGLVTRAEESREDQIPSSD
PMDQREQVKSTLRCARTSGDRKTRDRTLGDCDRTAVDRTTGDSGRMPGDRTSRDRTSSCD
RTSGEEREEMDRRTSFHPIYRYMDLGKEREREGESVEDTEESHGEGDEDEEGGRRGSRRT
SLTKRIANSSGYVGDRIKCVTTELYADSSKLSREQRALQMEVISREGSNISRPAANWERA
MMRFSELELKEKECGGVCVSAAVAGQELADRQRREREWEHCQHTARQGEREGGRQDYGNN
RVPVLQRCGGHRESLYPGQEAWEGDRDGAREGEGWRCSPPVLALADRHPQEKGGQGMVPI
RKHTHSLQKGEEEGEKTSEKARMNSDACVLWGSEQPTAPATNEDDDDEEVRKLKVCIELK
GLRLRKPTSSSPERPEVKEERTWSSHHSPSFLPRTRPPTPTWSPAHAPPPRDRKFKVDPE
VKPLSQKPEITKSWAREMLANGDAKRVGLLPSTQQRDRSAPQGPLMGQGCDWGSKEPRRG
GLGVKTEGQCPPPSAPEPPTEDTASLKPRRHSDTDKPKGKRPCKTKHISQREREQRRELL
NGGSNQHGSTDLGAALEDKVSEQCARRKRPSSPLHYLGSPVKPCSRATRPPSVPPQVNGS
GTVPPDGAGVRRALPAEPPVVRPIPPEARRLIVNKNAGETLLQRAARLGYEEVVLYCVEN
RVCEVNHRDYAGYCALHEACARGWISIVIHLLEHGADINCSAQDGTRPLHDAVENDHLDV
VRVLLSYGADPTLATYSGRGLLKMTHSDSMERFLTDYFADLQGRSNDDPEIYWEFYGSAV
CESLEEGSVCDILADPPGPEDKDRRELFEFEFSDRPLLPCYNIQVSLSQGPRNWLLLSDV
LRRLRMSARSFRSSFPHMEVVTMAEAEFYRQASLSQLFSCSDELEGFQPDSKELLDLVEG
SAELAALLGSNLECLDDRWDEPPEANANVDEKANVNGNIRAMANANSNVNAKVNGNIRAM
AKGNISAKTNGSTHVKAKANANRRS
NT seq
5838 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgccaggctaacgcccctggccaccatggggctggaccgcaatgccttgatg
cgggacggcctccgccatcacggcagcgtagtttacccagggatccgagcgctgtcggcc
gagaagccccacgaggggtccactaccctccccctcagctacaaccgggacggccttcca
gacctcctctacaagcctgacatttccatggaccggagcaagcctaccaacggctacctg
gacctgtacaagagctctccaccaagcctccatagaggaccagaagggctggacaggaga
ggtgtgggacctgggggggagaagccctcagagctgggtctggggggtgctggtgcagga
gcaggcgggtacctgcgtctgccctgggggctgagccgggggctgtaccccgaggcgggc
ctctacccctatatggactcttccaagtatgcggccctcagcatgtacaaggcccagttc
ctcaatcagcccagcccctacctgccccagcacctggcctaccagtccctctgtgcctcc
cagggggggaacatgaaccctgctgctgcctcggccgccgagaggctctactacatgccc
ccctaccccccgtcccccatctcctcctccctggtggggtctcccatgaggatcccagcg
gtgtcggtggcccccacctccatggtgcactgccaggagaagggattgagtgtcgggtct
cgtgtccaccacgaggggtctccgtttgggcagcagcttcaccagccgccccctccgccc
cagcaccttctccccccccacacagacagagaccgagacagaccccccagcagaagcaat
aagcccagtagacccccctccaacaaaggagccagtaacagcagtggtagtagtagtagt
agtggtggtagcagtggtgggagtaatactaatagtagtagccttcctattgattcctcc
cctcgcgcctcttctcgcctcccccagcctgctcctcccctgcctccccctcacatagac
agcaccatggacctacagagggcagtctctagaatagtaccgttatcttcctcctcttgt
tcctcttcctcttcccagacgatacctcactcattctatgtgagcagcatggctccagag
cacccatcccctgcctggcccagcccccacaaacccagacccagagatggggtgtcggat
cacagggctggaggatgtgagaagagacccagtcagtgcccttctaaaccatcctctgag
cggccagccccactgaaccagcccccgactaccaaagacccagcagacccaaagcctctc
gacctctctggaagattgttggagttaggcctgcctcctaacagcttccctgtgaagatg
gaggctctggggtccccggggcctcggtacggacctccccctagccgggagctcctgaaa
gagaccctctctctctcacccccctccctaccctcccactcccactcagtggtcagcagc
acttcctctaaagccccagagaggccggagatgatcagcactttgcactcctcctgggtg
gtgcccacccttacacccacctacaccattgggtctacccacgcacacccccacccccca
gccatgtccccatcccccaggcccagcccagacacccaagggaaaggctcctctccatct
gtcatcaaacacaaggctctggagagagtcctgccccagccccagcaacgcagtccatcc
tgccccagggtaggagagacaaatactaccccaataccttccaatctcaatcctccctcc
acaatacccttgtcccccaaacccaataatgattggcccaaacacagccccagccaatca
gaaagttcccccatggccggccatcttaggaactccacagagaagccccccaaagccccc
aagagggctgagacatcccaggaggtgtctccatataataaacgtcagtgtctagagaat
gccaatgggcacccacccagccacctctacctgccccagagcgaggcctacctacctcac
agcatggtgtacgccaaccgatacctgcactactctgtacccgacggcatggccctccac
tctctccctctgccagggaagggccctgcctaccctccccccatcctgcttggcagtaac
agcctttacccttcccacctggcagccaaacaccccttaccataccacagccacgctggg
gagtacctcacgtacaactcccaggagatggcccaccctctgatgcacacacacacagac
tctaaagccctggagcgggcagatcaggggcccaagtcccgtggccagggccaggacaaa
cctaggggactcaaagaggattttggtgtatcccacaggggccggagtgatgtggagaca
ggggaggggtcccatgtgaagcgcaataaagatgcaggggagtggggagggagccagccc
agacccctctcctcctccagcaccagtatcccttccaaagatagaatcgtctgcattgac
ctcgtccactccgacacagatggagagtccacgccggccgccaaccagccgccactccct
gtcatcgttcccatcaccaggggcaaccaacaccagtgtggccatggcgaccaaagcatg
agggaagtggagcgggagccagaacaccaactgcatcatcatcatcttcatcaccacccc
agcccaagctccaccctgagaactacccacacagacagacaaccagagaccccctgtatg
agacccaggcccctccaggagacaggctgtccgggtgtggcctctagcccacctcagggc
tccccaggactggttactcgggccgaggagagccgtgaggaccagatcccttcctcagac
ccaatggaccagagggagcaggtcaaaagcaccctgcgctgtgcccgcacatctggggac
cgcaagacgagagaccggactcttggagattgtgaccgcaccgcagtagaccgtacaact
ggtgatagtggccgcatgcctggcgaccgcacgtctagagatcgcacatcatcttgcgac
cgcacgtctggagaggagagagaagagatggacagacgaacctccttccaccccatctat
cgctacatggacctggggaaggaaagagaaagagaaggagagagcgttgaagacacagag
gagtcacatggagagggggatgaggacgaggagggtggacgaagaggttcacggaggacc
agtctgaccaagaggatcgctaactcttcaggctacgtcggcgaccgcatcaaatgtgtc
acaaccgagctgtatgcagactctagcaagctgagtcgggaacagcgcgccctgcagatg
gaagtcatatcacgagaggggagtaatataagtcgccctgcagctaactgggagcgggcg
atgatgcggttctcggagctggagctgaaggagaaggagtgcgggggggtgtgtgtgtct
gcagcggtagcaggacaggagttggcagaccgccagcggagagaaagagagtgggaacac
tgccaacacaccgccaggcagggagagagggagggtggaaggcaggactatgggaacaac
agagtcccagtcctccagaggtgtgggggccatagggagagcctgtacccagggcaggag
gcctgggagggggatagagatggtgccagagagggtgagggttggcgatgttcaccccca
gtcctggcactggcagaccggcacccccaggagaagggtgggcagggcatggtacccatt
aggaaacacacacacagcctacagaagggagaggaggaaggagaaaagacctcagagaag
gccagaatgaattcagatgcgtgtgtgctgtggggcagtgagcaacctacggctcctgct
actaatgaggatgatgatgatgaagaggtgaggaagctgaaggtgtgtatcgagctgaag
gggctccgcctccgcaagcccacctcttcctcccccgagaggccagaggtcaaagaggag
aggacatggtcatcacatcacagcccctccttcctgccccggacccgacccccgacacca
acctggagcccagcccatgccccgccccctcgggataggaagttcaaggttgatccggaa
gtgaaacctctgtcacagaagccagagatcacaaaaagctgggccagagagatgctggct
aatggagatgctaaacgagttggactgctcccttcaacccagcagagggacagatctgcc
ccccaggggcccctcatggggcaaggatgtgactggggatccaaggaacccaggagagga
gggctgggggtgaagactgagggtcagtgtccccccccctcggcccctgagccccccacc
gaagacacagcctctctcaagccccgtcgtcatagcgacacagacaaacccaagggcaag
cgaccgtgcaagaccaaacacatcagccagagagagagggagcagaggagagagctgctg
aacggtggcagcaaccagcatggaagcactgatctgggagcagctttggaggacaaggtc
agtgagcagtgtgctcggaggaagagaccctcttcgcccctccattacctcggttctccg
gtcaagccctgttcccgcgcaacgcggcccccttccgtaccccctcaggtgaacggctct
gggactgtcccaccggatggagcaggggtgaggagggccctgcctgctgagcctcccgtg
gtgcggcccatccccccagaggcgcggagactaattgtcaataagaacgccggagagacg
ctgttacagagagcagcacggctcggatacgaggaggtagtgctgtactgcgtggagaac
cgtgtgtgtgaggtgaaccacagggactatgcaggctactgtgccctccacgaggcctgc
gcccgcggctggatctctatagtcatacacctgctggagcacggggccgacatcaactgc
agtgcacaggatggcaccaggcctctgcatgacgcggtggaaaatgaccatctggacgta
gtgcgtgtgttgctgtcctacggggctgaccctactctagccacctactccggccgcggt
ctgctcaagatgacccacagcgacagcatggagcgattcctcactgattattttgctgac
ctgcagggccgctctaatgatgacccagaaatctattgggaattctatggcagcgctgtg
tgtgagtcgttagaggagggcagtgtgtgtgacatactggcggaccccccagggccagag
gacaaggacaggagggagctctttgagtttgagttctccgaccgacccctcctcccctgc
tacaacatccaggtgtccctgtcgcaggggcccaggaactggcttctcctctcagatgtt
ctccggcggctgcgaatgtctgcccgttccttccgctcctccttcccccacatggaggtg
gtgacgatggccgaggcagagttttaccgccaggcatctctctcccagctcttttcctgc
tcagacgagctggagggcttccagcctgacagcaaggagctgctggacctggtggagggg
agtgctgaactggccgctctgctgggttctaatctggagtgcctcgacgaccgctgggac
gaacccccggaggctaacgctaatgttgacgaaaaggctaatgtcaatgggaacattagg
gctatggctaatgctaacagtaacgttaacgctaaggtcaatgggaacattagggctatg
gctaaaggtaacattagcgctaagactaatggtagcactcatgttaaagctaaggctaac
gctaacagaaggtcgtga
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