Salvelinus namaycush (lake trout): 120064175
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Entry
120064175 CDS
T07522
Name
(RefSeq) collagen alpha-1(VIII) chain-like
KO
K23455
collagen type VIII alpha
Organism
snh
Salvelinus namaycush (lake trout)
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
120064175
NCBI-ProteinID:
XP_038870490
UniProt:
A0A8U1F6L7
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Position
Sna19:complement(16217650..16295832)
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AA seq
759 aa
AA seq
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MAVPSLSAPLLVALFQLAVLPLVHTGVYYGHKQHQQQPQQQPQQHQPMPHLSHMGMGSKE
QHRQQQWPGKEMPHMQYPHYRKEIPQMPMHMGKEYPRKGVVVNSGQDKGQTIPSGAVGGL
PGGLPGEQGPAGPAGPEGPSGPPGPPGVGQPGGEGKPGPAGPPGFPGVGKPGLPGIPGKP
GGMGDPGVPGELGPSGGDGHMGQPGPSGPPGPPGLPGIGKPGVGGLPGQPGPKGEPGHKG
LPGLPGLPGPKGDKGIGQPGQPGHKGPAGPPGPPGQGGMPGVGKPGMNGILGPPGGPGKP
GPPGEQGLAGPAGEGGETGPPGLPGQGKPGQNGLPGQPGMPGGKGHQGPPGLPGKPGLPG
FGKPGFPGPKGDKGMGGMPGGPGPKGDKGHGGLPGVIGPPGPIGPAGPLSPMGPPGGLGQ
PGPKGEAGEGGQKGLPGGQGEPGPPGLHGQNGFPGEGGEPGPRGPAGPVGPQGEGGHKGL
PGAPGVPGLSGPKGEGGLPGEKGPQGPKGVPGLGGAGGPIGPPGAPGSKGDSGLPGLPGV
EGNGNPGVPGPLGPPGKEGPGGPPGNPGQPGLPGPPGPPGPPALSPNMGAVLPEMGIPPG
LDGVKTAGYGKKGKYGGNSGEVMGANGLEMPAFTALVTIPFPPVGTPVVFDKILYNGRQN
YNPQTGVFTCDMPGIYYFAYHVHCKGANVWVALMRNDEPVMYTYDEYKKGFLDQASGSAV
LPLQPGDTVYLQLPSDQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgccttctctctcagcccctctcctcgtggctctgtttcagcttgcagtacta
cctctcgttcacacaggggtatactacggacacaagcagcaccagcagcaaccccagcag
caaccccagcagcaccagcctatgccacacctgtcccacatgggcatgggcagcaaagag
cagcaccgtcagcagcagtggccaggaaaggagatgccccacatgcagtacccccattac
agaaaagagatcccccagatgcccatgcacatgggcaaggagtacccccgcaaaggtgtg
gtagtcaacagtggacaggacaaaggtcagacaatccccagtggggctgtgggaggtctc
cctggaggcctgccaggagagcagggcccagctgggcctgcaggacctgagggaccctct
gggccaccaggtcctcctggggtaggacagccaggaggtgaaggaaaaccaggccccgct
ggtcccccaggattccctggtgtaggcaaaccaggactcccgggaattccaggcaagcca
ggtggcatgggagacccaggtgtacctggagagctgggccccagcggtggagacggtcat
atggggcagccagggccttcgggcccccctggtcctccaggtctcccggggataggaaaa
ccaggggttggggggttgccaggacaaccaggacccaagggggaaccaggacataagggc
ctgccgggactaccaggattaccaggacccaagggtgacaagggaattggacagccagga
cagccaggccacaaagggccagcaggaccccctggacctccaggccagggaggcatgccc
ggtgtgggcaagcctggaatgaatggtatattggggccaccaggaggaccagggaaacca
ggccctcctggagagcaggggctggctggaccagcaggagaggggggcgagaccggtcca
ccagggctgccaggccaagggaaaccaggccagaatggtctgcctggacaaccaggcatg
cccggtgggaaagggcaccaaggccctccaggtttgccggggaagcctggattgcccgga
tttggaaaaccaggattcccaggacccaagggagataaagggatgggtgggatgcccgga
ggcccaggaccaaagggagacaaaggccatggaggacttccaggtgtgattggaccacct
ggaccaatcggaccagctggtccccttagccctatgggaccccctggaggtcttggccaa
ccagggccaaaaggagaggctggagagggagggcaaaaggggctgccaggtggccagggt
gagcctggtcctcctggactgcatggtcagaatggcttccctggagagggaggagagcca
gggccaaggggtcccgctgggcctgtaggaccccaaggggaaggcggacacaaagggtta
ccaggcgcccctggcgttccaggcctatctgggccaaagggagagggaggacttccagga
gagaagggtccccaaggccctaagggcgttccaggtctgggaggtgcaggtgggccgatc
ggacctcctggtgcccctgggtctaaaggtgacagcggattacctggtcttcccggcgtt
gagggtaacggaaacccaggtgttcctggtcctcttggacctccaggtaaagaaggtcct
ggaggaccaccaggaaatccaggccagccaggtctacctggtcccccaggcccacccgga
ccccctgccctctcccctaacatgggagcagtcctccctgagatgggtattcctcctggg
ctggacggagtcaagaccgccggctatggcaagaaggggaaatatggaggaaacagtgga
gaggtgatgggcgccaatggcctggagatgcccgcgttcacggctctggtgaccataccc
ttcccaccagtgggaacgcctgtggtgttcgacaagatcctgtacaacggccgtcagaac
tacaacccccagacaggcgtgtttacctgcgacatgcccgggatctactactttgcctac
cacgtccactgcaaaggggccaacgtgtgggtggcgctgatgaggaacgatgagcctgtg
atgtatacgtatgacgagtataagaagggattcctggatcaggcgtcggggagcgcagtg
ttacctctacagcccggggacaccgtgtacctccagctaccctcggaccaggccgcagga
ctatacgctggccaatacgtccactcatccttctctgggtacttgttgtaccctatgtaa
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