Salvelinus namaycush (lake trout): 120064178
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Entry
120064178 CDS
T07522
Name
(RefSeq) amyloid-beta A4 protein-like
KO
K04520
amyloid beta A4 protein
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120064178
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120064178
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
snh00535
]
120064178
00536 Glycosaminoglycan binding proteins [BR:
snh00536
]
120064178
Peptidases and inhibitors [BR:
snh01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
120064178
Proteoglycans [BR:
snh00535
]
Cell surface proteoglycans
Others
120064178
Glycosaminoglycan binding proteins [BR:
snh00536
]
Heparan sulfate / Heparin
Others
120064178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APP_E2
APP_N
APP_Cu_bd
APP_amyloid
Beta-APP
LIN37
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
120064178
NCBI-ProteinID:
XP_038870493
UniProt:
A0A8U1F6Q1
LinkDB
All DBs
Position
Sna19:15495728..15528296
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AA seq
685 aa
AA seq
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MVERTAFLLLWVATLTLTSEVPSDDSVALLAEPQVAMFCGKLNMHVNIQSGKWEPDPSGT
KSCIGTKEGILQYCQEVYPELQSTNVVEANQPVSIHNWCKKGRKQCRSHTHIVVPYRCLV
GEFVSDALLVPDKCKFLHQERMDMCESHLHWHTVAKESCGDRTMNLHDYGMLLPCGIDLF
RGVEFVCCPADTHRESESVELTESDVWWGGAETEYTDNGMLHQADQGAATTEDDEDAFDR
DEDGDGDEDEDDVTDKRDSGERTSNIAMTTTTPTTTESVEEVVRVPTTAPPPPDAVDHYL
ESTGDDNEHADFQKAKESLEAKHRERMSQVMREWEAAERQAKSLPHADKKAVIQHFQEKV
EALEQEAAGERQQLVETHMARVEALLNSCRRMALDNYLSALQANPPRPRQVLGLLKKYVR
AEQKDRQHTLKHYEHVRMVDPKKAAQIRPQVMTHLLAIDERMNQSLGLLFKVPSMANKIQ
DQVSILMQRVQSELSQQVSSLQSDERTDVRVSYGNDALMPDQAYSSAPLDPGMGLDRLGF
IHPESFNQPNTDNHVEPVDARPVPDRGLPTRPVSALRPEEFPEVRMEKGEQQSASYEVHH
QKLVFFAEDVGSNKGAIIGLMVGGVIIATVIVITLIMLRKKQYTSIHHGVIEVDAAVTPE
ERHLSKMQQNGYENPTYKFFEQMQN
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggtcgagcgaacagcatttctgttgttatgggtggcgaccttgacgctgacatcggag
gtgccatctgatgactcagtggctctgctagcggagcctcaggtggccatgttctgtggg
aagctcaacatgcacgtcaacatccagagtggcaagtgggagccggacccctccggcacc
aagagctgcatcggaaccaaggagggcatcctgcagtactgccaggaggtgtaccctgag
ctccagagcacaaacgtggtggaggccaaccagccagtcagcatccataactggtgcaaa
aagggacgcaagcagtgtcgcagtcacacacacatcgtggtgccctaccgctgcctggtt
ggggagtttgtgagtgatgcgctgctggttcctgataagtgcaagttcctgcaccaggag
agaatggacatgtgtgagagccatctgcactggcacaccgtggctaaagagtcctgtgga
gaccgcaccatgaatctccatgactacggcatgctgttgccatgtggcatcgaccttttc
cgaggggtggagtttgtgtgttgcccggcagacacgcatcgcgagtcagagagcgtcgag
ctgactgagtctgacgtgtggtggggcggagccgagactgaatacaccgataacggcatg
cttcaccaggcggatcagggggctgccaccactgaggatgatgaggatgccttcgatagg
gacgaggacggtgacggtgatgaggatgaagatgatgtgactgacaaacgggacagtggt
gaacgcacctccaacatcgccatgacaactaccaccccgaccaccactgagtcggttgag
gaagttgtcagagtgcccaccacggcccctcccccccctgacgcagtggaccattacttg
gagtctaccggagacgacaacgaacacgccgacttccagaaggccaaggagagtctggag
gccaagcaccgcgagaggatgtcccaggtgatgagagagtgggaggcggcagagagacag
gccaagagtctccctcacgctgacaagaaggctgtcattcagcacttccaggagaaggtg
gaggccctggagcaggaggcagcaggagagagacagcagctggttgagacccacatggcc
cgggtggaggccctgctcaacagctgccgtcgcatggccctggataactaccttagcgcc
ctgcaggccaacccacccaggcctcgtcaggtgctgggccttttgaagaagtatgtccgt
gcagagcagaaggacagacaacacaccctgaaacactacgaacacgtccgcatggtcgac
cccaagaaggctgctcagatccgaccccaggtgatgacccacctgcttgcgattgacgag
aggatgaaccaatctctggggctgctcttcaaagtgcccagcatggccaacaaaatccaa
gaccaagtttcgatcctgatgcagagggttcagtcagagctgtctcagcaagtctcatct
ctgcagagtgatgagaggactgatgtcagggtgagctatgggaacgatgccctgatgcct
gaccaggcctacagctctgcccctctggaccctggcatgggcctggacagactcggcttc
atccacccagagagtttcaaccaacccaacaccgacaaccatgttgagcctgttgacgct
cgtccagttccagatagaggtctgcccactcggcctgtctctgctctgaggcctgaggag
ttccctgaggtgcggatggagaaaggagagcagcaaagcgccagctatgaagtgcatcat
caaaaattggtgttctttgctgaggatgttggctccaacaagggtgccatcattgggctg
atggtgggtggggttatcatagcgacagtcatcgtcatcactctgatcatgctgaggaag
aagcagtacacctccatccatcacggagtcatcgaggtggatgctgcagtgaccccagag
gagcgacacctgtccaagatgcagcagaacggttatgagaaccccacctacaagttcttc
gaacagatgcagaactaa
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