Salvelinus namaycush (lake trout): 120064216
Help
Entry
120064216 CDS
T07522
Name
(RefSeq) CLIP-associating protein 1-B-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120064216
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120064216
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
120064216
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
120064216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
TOR1L1_N
Cnd1
Sec7-like_HUS
HEAT_DAAF5
ParcG
TAN
MMS19_C
Motif
Other DBs
NCBI-GeneID:
120064216
NCBI-ProteinID:
XP_038870552
UniProt:
A0A8U1F658
LinkDB
All DBs
Position
Sna19:complement(21720581..21833590)
Genome browser
AA seq
1536 aa
AA seq
DB search
MEENMEYCLAQVVQKDLGRKVQVGQELIDYILDKDRSQDLEQDQTGLDRMVDSIATTWVN
CSNFKVALLGIDLLSALVTRLQDRFRNHVGTVLPSLIDRLGDSKDQVRDQDQILLLKIME
QAATPQYVWDRMLGGFKHKNNRTREGVCLCLISTLKMYGAQGLTLSKIVPHICNLLGDPT
SQVRDGAMGCLVEIYRHVGERVRMDLSKKGLPQSRLNVIFSRFDEVQRSGNMIPSSASDK
NFDDEDSVDGGRSCSSASSSKAPPSGRRTVAAASVRRPSSATGPGKISAKDAAAGAVDEE
DFIKAFEEVPTIQIHSNREMEDNLSKVREVLSDDKNDWEHRVIALKKVRSLLLAGAMEYD
SFPQQLRLLEAPLKLSAKDLRSQVVREACITLGYLSTLMGNKFDHCAEILMPTLLNLVPN
SAKVMATSGMAAIRLILRHTHYSRLIPIITSNCTSKSVAVRRRSYEFLELLLLEWQTHTL
ERHVAILTETIRKGIHDADSEARSVARKCYWGFHGHYSREAEHLFQALESTYQKALQSHL
KSSDSVVSLPQSDRSSSSSQESLNRPLSVKSVIGGGMTRGKMVSSRVNSNPGGSLQRSRS
DIDVNAAASAKSCLVTVPSASPFSSAAALPPGSYASLGRVRTRRTSAGSAVGASATVTDS
RGRSRAKMVSQSQPGSRSSSPGKLLGHSSGYGRISRPPSASSTPADKRSKVPRSQGCSRD
SSPSRLGLARLCGKALVPGTPLSSYHMLARSRIPRPSMSQGCSRETSRESSRDTSPARGF
KPLDRFGLIHQDRISASVNAMRVLNTGTEVEAAVADALLLGDSRNKRKPMRRRYESPGIY
SDDDANSDASSACSERSYGSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLLGLQNL
LKNQRILSRVELKRLCEIFSRMFADPHSKRVFSMFLETLLDFILVHREDLQDWLFVLLTQ
LLKKMGADLLGSVQAKVQKALDITRESFPFDHQFNILMRFIVDQTQTPNLKVKVAILKYI
ESLARQMDPTDFVNSSETRLAVSRIITWTTEPKSSDVRKAAQVVLISLFELNTPEFTMLL
GALPKTFQDGATKLLQNHLKNSSNTSSVSSPSNTIGRTPSRHPPSRTSPLTSPTNCSHGG
LSPSMLEYDTENMNSDEIYSSLRGVTEAIQSFSYHSQEDLNELRGKRDDAAGREGVAPSP
GSDAHLGLDVVEGGRTALDNKTSLLNTPSPRSFSGPRAREFAPYGYGDTITSSYDKSALK
EAVFDDDVEQFRDCRRQDSSGENKMVLSKGFAPGSQDHSDLVADLLKELSNHNERVEERK
GALVELLKITREDSLAVWDEHFKTILLLLLETLGDKDYTIRALALRVLKEILRNQPARFK
NYAELTIMKTLEAHKDSHKEVVRAAEESASTLAGSIHPEQCIKVLCPIVQTADYPINLAA
IKMQTKVIERITKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEELKPH
LQLLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSSHS
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaatatggagtactgtctggcccaggtggtgcagaaagacctggggaggaaa
gtgcaggtgggacaggagctcatagattacatcctggataaggacaggtcccaggatctg
gagcaagaccagacaggtctggacaggatggtggacagcatcgctaccacctgggtcaac
tgttccaacttcaaggtggctttgcttggaatagaccttttatctgccctagtgacaagg
ttacaggaccgatttaggaaccatgtgggaacagtactgcccagtctgatagatcgtctg
ggggattccaaagaccaagtcagagaccaagatcaaatcttgctgctgaagatcatggag
caggctgctaccccacagtacgtgtgggacagaatgctgggaggcttcaaacacaagaac
aacaggaccagagagggagtgtgcctttgtctcatctcaacgctcaaaatgtacggagcc
caaggcttaaccctcagtaaaatagtccctcacatatgtaatctactaggagatcccacc
agtcaggtgagagacggagctatgggctgcctggtggagatctacagacatgtgggggag
agggtgaggatggacctcagcaagaagggcctaccacagtcacggttgaatgtaatcttc
agtagatttgatgaagtccaaagatctgggaacatgatcccatcctcagcttcagataag
aactttgatgatgaggactctgtggatgggggccggtcctgctcctccgcatcgtcctcc
aaagcgccccccagtgggaggaggactgtagctgcagcttctgtccgcaggcccagctct
gccaccggacccggcaagatctctgctaaagatgctgctgcaggagcagtagatgaggag
gacttcatcaaggcttttgaagaggttcctactatccagatccactccaacagagagatg
gaggacaacctctccaaggtccgggaggttctgtctgacgacaaaaacgactgggagcac
cgagtcatcgctctgaagaaggtgcgttctctgctcctggctggagctatggagtatgat
agtttccctcagcagctccgtctgctggaggcccctctgaagctgtcggctaaagacctg
aggtcccaggtggtacgagaggcctgcatcacactgggatacctgtccacactaatgggc
aacaagtttgaccactgtgcagagatcctgatgcccacactgctcaacctggtgcccaac
agtgccaaggtgatggctacgtctggcatggcagccatacgtctcatcctcaggcataca
cactactcacgtctcatcccaatcatcactagtaactgcacgtccaaatcagtggccgtc
agacggcgcagttatgagttcttagagctgttattactggagtggcagacacacacactg
gagaggcatgtggctattctgacggagaccatcaggaaagggatccatgatgccgactca
gaggccaggtccgtggccagaaagtgttattggggtttccatggccactacagccgggaa
gcggagcatcttttccaggccctggagtcgacctatcagaaggctctccagtctcacctg
aaaagttctgacagtgtcgtgtccctcccccaatcagaccgctcatcctcctcctctcag
gagagcctcaaccggcccctgtctgtcaagagtgtcataggaggcggcatgacaaggggg
aagatggtgagttccagggtgaactctaaccccggcggttctctccagcgttcccgtagt
gacatcgatgtgaacgctgcggccagcgccaaatcctgtctggtcaccgtgccctccgct
tctcccttcagctcagccgctgctctgcccccaggctcctacgcctctctaggtcgtgtg
cgtacgaggaggacaagcgctggcagtgccgtcggagccagcgctactgtgactgacagc
agggggcgcagccgagccaaaatggtatcccagtcccagcctggcagtcgctccagttcc
cctggaaagcttctgggccactcgtctgggtacgggaggatcagcaggcccccctcagcc
tccagcacccctgcagacaagaggagcaaggtcccccgcagccagggctgcagtagagat
tcctctcccagccgactgggactagccaggctgtgtggtaaagctcttgttcctggtact
cctctctcctcctaccacatgctagcgaggagccgtatcccccggcccagcatgagtcag
ggctgcagcagggaaacctctagggaaagcagccgagacaccagccctgctcggggcttc
aagcctcttgatcggtttggcttgattcaccaggaccgtatctctgcctcagtaaatgcc
atgagagtcctcaacactggcactgaggtggaggctgctgtggctgatgcactgctatta
ggagactccagaaataagaggaagcctatgaggcggcggtatgagtctccgggtatctat
tctgacgacgatgctaacagcgatgcgtccagcgcatgctcagagcgctcatacgggtcc
aggaacggaggtatccctcactatctgcgtcaaacggaggatgtggcggaggtgctaaac
cactgtgccagctccaactggtcagagaggaaggaggggctgctgggtctgcagaaccta
ctcaagaaccaaagaatactcagccgagtggagctgaagagactatgtgagatcttcagc
aggatgtttgcagatccacacagcaagagagtgtttagtatgtttctggagactctgttg
gactttatcttggtgcacagagaagacctgcaggactggctgtttgtcctgctcacccag
ctactgaagaagatgggagctgacctgctggggtctgtccaggccaaggtccagaaggct
ctggacatcaccagggagtcttttccgtttgatcaccagttcaacatcctgatgaggttc
attgttgaccagacacagacacccaacctcaaggtgaaggtggccattctgaagtacata
gaatcactggcaagacagatggatcctacagactttgtcaactccagtgaaactcgactg
gctgtatctcgcatcattacctggaccacagagcccaagagctccgacgtcaggaaggcg
gcccaggttgtgctgatctctctgtttgagctgaacaccccagagttcaccatgctgctg
ggagccctgcccaagaccttccaggacggggccaccaagctgctccagaaccacctgaag
aactccagcaacaccagcagcgtgagttctcccagcaacactattgggcggaccccaagc
cggcaccccccaagccggaccagccctctcacttccccgaccaactgctcccatgggggg
ctatctcccagtatgttggagtatgacacagagaacatgaactctgatgagatctacagc
tccctgcgaggggtcacagaggccatccagagcttcagctaccacagccaggaggacctc
aacgagttgagagggaagagggacgatgctgcgggacgggaaggtgtggcgccctctcca
ggctctgatgcccatctggggctggatgtggtggagggtgggcgtacggccctggataac
aagacctcccttctcaacaccccgtccccccgctccttctctgggccgcgagccagggag
ttcgccccctacggatacggagacaccatcacctcatcctacgacaagagcgccctgaag
gaggccgtgtttgatgacgacgtggagcagtttagagactgccgtcggcaggacagcagt
ggtgaaaacaagatggtgctgtctaagggctttgctccaggttcccaggaccactcggac
ctagttgcagacctgctgaaggaactgtctaatcacaatgaacgcgtggaggagcgtaaa
ggggcgttggtggagctcctgaagatcacccgggaggacagcctggccgtgtgggacgaa
cacttcaagaccatcctcctactgctcctggagacactgggggataaagactacactatc
cgggccctggcgctgagggtactgaaggagatactgcggaaccagccggcccgcttcaag
aactacgctgaactcaccatcatgaagaccctagaggcacacaaagactcccacaaggag
gtggtaagagcagcggaggagtctgcctccaccctggccggctccatccacccagagcag
tgtatcaaggtgctgtgtcccatcgtccagacggctgactaccccatcaacctggctgcc
atcaaaatgcagaccaaggtgatagaacgcatcaccaaggagtccctgcaccagctgttg
cctgacatcataccaggactactgcagggctatgacaacacagagagtagtgttcgcaag
gccagcgtgttctgtctggtggccatctactctgtgattggagaagagctcaaaccacac
ctgcagctactcacgggcagcaagatgaagctgctgaacttgtacatcaagagggctcag
acaaccaacagcaacagcagcagttcctcggatgtctcttcacacagctag
DBGET
integrated database retrieval system
