Salvelinus namaycush (lake trout): 120064267
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Entry
120064267 CDS
T07522
Name
(RefSeq) integrin alpha-4-like
KO
K06483
integrin alpha 4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
snh04514
Cell adhesion molecules
snh04672
Intestinal immune network for IgA production
snh04810
Regulation of actin cytoskeleton
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120064267
04514 Cell adhesion molecules
120064267
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120064267
09142 Cell motility
04820 Cytoskeleton in muscle cells
120064267
04810 Regulation of actin cytoskeleton
120064267
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120064267
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120064267
04515 Cell adhesion molecules [BR:
snh04515
]
120064267
04090 CD molecules [BR:
snh04090
]
120064267
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120064267
Exosomal proteins of other cancer cells
120064267
Cell adhesion molecules [BR:
snh04515
]
Integrins
Integrin alpha subunits
120064267
CD molecules [BR:
snh04090
]
Proteins
120064267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_3
FG-GAP_3
DUF5370
Motif
Other DBs
NCBI-GeneID:
120064267
NCBI-ProteinID:
XP_038870639
UniProt:
A0A8U1F7A0
LinkDB
All DBs
Position
Sna19:complement(27221672..27267302)
Genome browser
AA seq
1019 aa
AA seq
DB search
MERKKPVNLYCCWSFLLAWCCSLTDCYNLDVDHPVSFNGPNGSLFGYSVLLHKNKQHTWL
LVGAPVANSTFDPSLIKPGAIYKCNFSGNRECQQISTGVDSCGKTCFSESDNQWLGVSLS
RQPSDGHVLACGHRWKNVFYSRKDNQNKLPHGVCYRYEADLKQSQPLIPCYKDHQRKFGE
DYGSCQAGISNFLNEDLIIMGAPGTSYWTGSVLVYNTSSMVLSAYVDDDSTVLYGSYLGY
SVGAGHFLHPDSTEIVGGAPQHRQTGKAYLFRAEENMLKIIGEVKGSKLGSYFGASVCAV
DLNGDGLSDLLVGAPMYSTMREEGRVHVYINQGAANMKEAEFQLAGSKSYAARFGETITD
LGDIDDDGFPDVAVGAPQEEELRGAIYIYNGRKTGISQTYSQRITGSLLGNELKMFGQSV
SGGIDVDGNGYQDVAVGAFLSDSAVVLRTRPVVVVEASMPLPVSVNRSVALCSDNGLPAV
CINVTVCFRVRARRYNGLIELQYNLTADTHHKESFPSRFHFHGNGTSNVTTGQVKARHDQ
LTCVTHQAFMRKDVRDIFTPIHFEATYALKQHTVRHRASRIFPALKPILQQRGGHSNLVA
NKTEFARYCSLANCSTNLQVSAYLVLPQKHNNIQYFALGNGKTIMLNTTLVNAGDDAFLP
RLQLRFPSNLHYIKVLDAEEKYVSCDISEENKTIVGMDCSVGNLYFSSGAKVNISFLLDV
NQSSSAGDISISINTSGDNYENEDLLHDNSATLMLPLRYGVDVSVHGFVTPTSFVFGDQE
PTPVDCYTETFNYTYKVVNIGPSKSLNTEFEIDIPKILSPYPYRLLHIADFQTSLGECSI
KNSSITVEDDCEVPQSSLIKELVFFFSKTSKRKMFCAHGDDLCLTLVCRLGDMDIGKEAT
IQMEVKLNPTVLQLTPGRHGVMLIESTGIITSPREDPHTILLQQTPIAQVVLEARFNQKP
QAAVEGFIIVGSLLVGLLILALLIFALWKAGFFKRQFKKEIRRDSWDYVPKSEKTESIS
NT seq
3060 nt
NT seq
+upstream
nt +downstream
nt
atggagcgaaagaagccggtgaatctttattgctgttggagctttcttctcgcttggtgc
tgtagtctcactgactgttacaatttggatgtagaccatccggttagtttcaatggccca
aatggatctttatttggctattctgtattgttacataagaacaagcaacacacatggtta
ttagtcggagctccagttgcgaattcaacattcgatccatcccttataaaaccaggagca
atttataagtgcaacttctcaggcaatagagaatgtcagcaaatatcaacgggtgtggac
agttgtgggaagacttgcttctctgagagtgacaaccagtggctcggagtcagcctgtct
agacagcctagtgatggccatgtattggcatgtgggcatcgttggaagaacgtgttctat
tccaggaaagacaatcagaacaagctgcctcatggtgtctgctacagatacgaagctgac
ctcaaacagtctcaaccacttatcccatgctataaagatcatcaacggaagtttggtgaa
gactacggatcatgccaagcaggaatatccaactttctgaatgaggacttgataataatg
ggagcccctgggacatcgtactggactgggtctgttctggtctacaacacctccagtatg
gtcctgtctgcctatgtggatgatgacagcactgtcctctatggcagttatctgggctac
tcggttggcgccggccacttccttcaccctgactccacagagatcgttggaggtgcaccc
cagcacaggcagactggtaaagcctacctattcagagctgaagaaaacatgctgaagatc
atcggtgaagtcaagggaagcaagctgggctcgtattttggtgccagtgtgtgtgccgtg
gacctgaatggagatggcctgtctgatctactggtaggagctcccatgtacagcaccatg
agagaggagggacgagtccatgtctacatcaaccaaggagctgctaatatgaaggaagca
gagtttcagttggctggaagcaaatcgtatgctgcaagatttggggagaccataaccgat
ctgggcgatattgatgacgatggctttcctgatgtggcggtgggggctccgcaggaggaa
gagctgcgtggggctatatatatctacaatgggaggaagacagggatctctcagacctac
tctcaaaggatcaccgggtctcttctgggtaatgagttaaagatgttcggccagtctgtt
tccggaggcatcgatgttgacggaaacggttaccaagacgttgcggtaggggccttcctc
tcggactccgctgtggttctgaggactcgtccggtggtagtggttgaggcctccatgccc
ctgcctgtcagtgtgaaccgctctgtagctctgtgttctgacaacggtcttcctgctgtc
tgcatcaacgtgacagtctgctttagggtccgcgctcgacgctacaacggactcatagaa
ctgcagtataacctgacagccgacacacaccacaaggagtctttcccctcccgcttccat
ttccacggcaacgggacatccaacgttacgacagggcaagtcaaggccagacacgaccag
ctgacctgcgtcacccaccaggccttcatgaggaaagatgtccgggatatcttcacgccc
atccattttgaggcgacgtacgccctcaaacagcacactgtccgtcaccgggcatccaga
atattcccagccctgaaacccatcctgcagcagagaggggggcacagcaacctggtagcc
aataagactgagtttgctcggtactgttcattggccaactgttcaaccaatctgcaggtc
tctgcatacctggtcttaccacagaaacacaacaacatacagtactttgcattgggtaat
gggaagaccatcatgttgaacacaaccctggtgaacgctggagatgatgccttcctcccc
aggctccagttacgcttcccctccaacctgcactacatcaaagtccttgatgcagaggag
aagtatgtgagctgtgacatttcagaggagaacaagacaatagtaggaatggactgtagt
gttgggaacctgtacttcagctctggagccaaggtgaacatcagctttctgttggatgta
aaccagagtagcagtgctggtgacattagcatatccatcaacactagtggagacaattat
gaaaacgaggatcttctgcatgacaactcagccactctgatgttaccgttgagatatggc
gtggatgtaagcgtccatgggtttgttactccaacatcctttgtatttggtgaccaggag
cctactccagttgattgctacacagagacattcaactacacttacaaggtcgtcaatatc
ggtccaagcaaatctctcaacacggaatttgagattgatattcccaagatactatcacca
tatccatacagattactccacattgcagattttcagacctctcttggagaatgctccatt
aaaaacagctccatcacagtagaagatgattgtgaggtgccacagtcctctttaatcaag
gaactggtcttcttcttctccaaaaccagcaaacgcaaaatgttctgtgctcacggagac
gacctgtgcctgactctggtgtgtagactaggagacatggacattgggaaagaagccacc
attcagatggaagtgaagctcaaccccaccgttctacagctcacaccgggtcgtcatgga
gtgatgctgatagagagtactggcatcatcacatcaccaagggaggaccctcacaccatc
ctattacagcagacccctatcgctcaggttgtgttggaggcccgcttcaaccagaagcct
caggcagcagtggaggggttcatcattgtagggagtctactggtgggactcctgatcttg
gccctgctcatcttcgccctctggaaggctggtttcttcaagaggcagtttaagaaggag
atcaggagggatagctgggactatgtaccaaagagtgagaagactgagagtatatcctaa
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