Salvelinus namaycush (lake trout): 120064285
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Entry
120064285 CDS
T07522
Name
(RefSeq) guanylate-binding protein 1-like isoform X1
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120064285
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
120064285
NCBI-ProteinID:
XP_038870669
UniProt:
A0A8U1F7C1
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Position
Sna19:28692901..28703397
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AA seq
690 aa
AA seq
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MDSPMCLVENADGELHVVPGAIKYLMGLNQKVVVVSVVGLYRTGKSYLMNKLAGKRKGFA
LGATIQSKTKGIWMWCVPHPEKRDHTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTL
VYNSRGTIDNQAVENLQYVSELTERIKVNSSSAASSSHDDEEGGDAQFVQFFPNFVWAIR
DFTLLLEIDGRNVTEDEYLEHSLELRKGGGKKNLMYNLPRECIRNYFPSRKCFVFPTPTT
PANMPHLDSMDEAGLCGSFRKVADTFCCFIFQESRTKTVKGGHNVTGRMLGHLVNTYVET
IAKGSVPCLENAVLAMAQIENQAAVDEGQVVYQRGMEEVKALFPVDMGQISAHHLRSDHQ
ATQAFMKRSFKDENGDFLKALAVAIAKHYAVLLIQNEDASEKKCAALLEKLSAPMAQKIK
EGIYTTPGGYELYCSHHDNMVAQYRAKPDKGVRAEEILEQFLREKSLEKNSILQADKKLT
ENEKKIHEEQEKRALAEQAVKMEAEKQHQLEKLIQERERSHQEGICQLEAKMVQEAKEKQ
QELERALDSKLHEQEKLMAKGFTEKEAAMKEEIQSLREKEEAKCEEKEEQSRNFRAIAQG
VMESVSNGLGHYFNYKKAREQRKAIVFKEQVRFNLKSGAVGNIPDKERMTLKQDKMATPK
LKTGAVGNSKDTTLPKVNTGTTGKSPGSEV
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atggattccccaatgtgtctggtcgaaaacgccgacggggagcttcatgtagtccctggt
gccatcaagtacctgatgggactgaaccagaaagtcgtagtggtgtcggtggtcgggctg
taccgcaccggcaagtcctacctcatgaacaagctggctggaaagagaaaaggttttgcc
ctgggagccaccatccaatccaagactaagggaatctggatgtggtgtgtgcctcaccct
gaaaaaagagaccacaccctggtgctgctggatacagaggggctgggggatgtggagaag
ggagattctaagaatgatgcctggatcttctccttggccattctgttaagcagtactctg
gtctacaacagtcgagggaccatcgacaatcaagccgtggagaacctccaatatgtgagt
gagctgacagagcggatcaaggtgaattcttccagtgcagcttcatcctctcacgatgac
gaggaaggaggggacgcccagtttgtgcagttctttccgaattttgtgtgggccatcaga
gatttcactctactactcgagatcgacggcagaaacgtcactgaagatgagtatctggag
cattccctggagctcagaaaaggtgggggtaaaaagaatctgatgtacaacctcccacga
gagtgcatccggaactacttcccctcgcgcaagtgctttgtattccccacccctacaact
cctgccaacatgccccacctggattccatggacgaggctggcctgtgtggaagcttccga
aaggttgcagatactttctgctgctttattttccaggagagccgtacaaaaactgtcaaa
gggggccacaacgtaaccgggagaatgctcggccacttggttaacacctatgtggagacc
atagccaaaggctctgtgccctgtctggagaatgcggtgctggccatggctcaaattgag
aaccaggctgctgtggatgagggccaggtagtataccagaggggcatggaggaggtgaag
gccttattccctgtggacatgggtcagatttcagctcatcacctccgctcagaccaccag
gccacgcaggctttcatgaaacgatccttcaaagacgaaaatggggatttcttgaaagcg
ttggcggtggccattgcaaagcactacgctgtccttctcattcagaacgaggatgcctca
gagaagaagtgtgcagcccttctggagaagctgtctgctccgatggcccagaagattaag
gaggggatctacaccacacctggaggatatgagctttactgcagtcaccatgacaacatg
gtggcacagtaccgggccaagcctgataaaggagttagggctgaggagattcttgagcag
ttcctgagggagaagagtctagagaagaattccatcctacaagctgacaaaaaattgacc
gaaaatgagaaaaagatccacgaggagcaagagaagagagccctggctgaacaggcagtg
aagatggaggcagagaaacagcaccagttagagaaactgatccaggagagggagaggagt
catcaggagggaatctgtcagctagaggctaagatggtccaggaggcgaaggagaagcaa
caggagttggagagagcgctagatagcaagctccatgagcaggaaaagctgatggctaag
ggcttcacagagaaagaggcagccatgaaggaggagatacagagcctgagagagaaggag
gaggccaagtgcgaggagaaggaagagcagtctcgtaacttcagagccatagcacagggt
gtcatggagagtgtcagcaatggcttaggtcactactttaactataagaaagcccgtgag
caacgcaaggcgattgtgttcaaggagcaggtcagattcaatctcaaatcaggtgcggtt
ggcaatatccctgataaggagcgcatgacactcaagcaagacaagatggccacgcccaaa
ctcaaaacaggagcagttggcaactctaaagacacaactctgcccaaagtcaacacaggt
acaactggcaaaagccctggctcagaggtctaa
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