Salvelinus namaycush (lake trout): 120064293
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Entry
120064293 CDS
T07522
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120064293
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
RuBisCO_large_N
ATPase_RavA_C
Motif
Other DBs
NCBI-GeneID:
120064293
NCBI-ProteinID:
XP_038870679
UniProt:
A0A8U1F6H7
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Position
Sna19:28847454..28853439
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AA seq
620 aa
AA seq
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MDSPMCLVENADGELHVVPGAIKYLMGLNQKVVVVSVVGLYRTGKSYLMNKLAGKRKGFA
LGATIQSKTKGIWMWCVPHPEKRDHTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTL
VYNSRGTIDNQAVENLQYVSELTERIKVNSSSAASSSHDDEEGGDAQFVQFFPNFVWAIR
DFTLLLEIDGRNVTEDEYLEHSLELRKGGGKKNLMYNLPRECIRNYFPSRKCFVFPTPTT
PANMPHLDSMDEAGLCGSFRKVADTFCCFIFQESRTKTVKGGHNVTGRMLGHLVNTYVET
IAKGSVPCLENAVLAMAQIENQAAVDEGQVVYQRGMEEVKALFPVDMGQISAHHLRSDHQ
ATQAFMKRSFKDENGDFLKALAVAIAKHYADLLIQNEDASEKKCAALLEKLSAPMAQKIK
EGIYTTPGGYELYCNHHDNMVAQYRAEPDKGVGAEEILEQFLREKSLEKNSILQADKKLT
ENEKRIYEEKERSAVLEQEKKAAEEKRLEMERTMEDDRRSKDEKLKQMEEKMKEEMKQQE
RDFHRALECKVQEQKDLLEKGHKEKADLMRQEIEEFKKSNTPGKDGGGFLESTVMPVLRF
GLDAANTFFQYKLMRGAFMK
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggattccccaatgtgtctggtcgaaaacgccgatggcgagcttcatgtagttcctggt
gccatcaagtacctgatgggactgaaccagaaagtcgtagtggtgtcggtggtcgggctg
taccgcaccggcaagtcctacctcatgaacaagctggctggaaagagaaaaggttttgcc
ctgggagccaccatccaatccaagactaagggaatctggatgtggtgtgtgcctcaccct
gaaaaaagagaccacaccctggtgctgctggatacagaggggctgggggatgtggagaag
ggagattctaagaatgatgcctggatcttctccttggccattctgttaagcagtactctg
gtctacaacagtcgagggaccatcgacaatcaagccgtggagaacctccaatatgtgagt
gagctgacagagcggatcaaggtgaattcttccagtgcagcttcatcctctcacgatgac
gaggaaggaggggacgcccagtttgtgcagttctttccgaattttgtgtgggccatcaga
gatttcactctactactcgagatcgacggcagaaacgtcaccgaagatgagtatctggag
cattccctggagctcagaaaaggtgggggtaaaaagaatctgatgtacaacctcccacga
gagtgcatcaggaactacttcccctcgcgcaagtgctttgtattccccacccctacaact
cctgccaacatgccccacctggattccatggacgaggctggcctgtgtggaagcttccga
aaggttgcagacactttctgctgctttattttccaggagagccgtacaaaaactgtcaaa
gggggccacaacgtaaccgggagaatgctcggccacttggttaacacctatgtggagacc
atagccaaaggctctgtgccctgtctggagaatgcggtgctggccatggctcaaattgag
aaccaggctgctgtggatgagggccaggtagtataccagaggggcatggaggaggtgaag
gccttattccctgtggacatgggtcagatttcagctcatcacctccgctcagaccaccag
gccacgcaggctttcatgaaacgatccttcaaagacgaaaatggagatttcttgaaagcg
ttggcggtggccattgcaaagcactacgctgaccttctcattcagaacgaggatgcctca
gagaagaagtgtgcggcccttctggagaagctgtctgctccgatggcccagaagattaag
gaggggatctacaccacacctggaggatatgagctttactgcaatcaccatgacaacatg
gttgcacagtaccgagccgagcctgataaaggagttggggctgaggagattcttgagcag
ttcctgagggagaagagtctagagaagaattccatcttgcaggctgacaaaaaattgacg
gaaaatgagaaaagaatctatgaggagaaggagagatcagctgtgctggagcaggagaag
aaggctgctgaagagaaacggttggagatggagcgcaccatggaggacgatcgcagaagc
aaagacgagaagttgaagcagatggaagagaagatgaaggaggagatgaagcaacaggaa
cgggacttccacagggccttggagtgcaaggtgcaggagcagaaggatctgctggagaag
ggccacaaggagaaggctgacttaatgagacaggagatagaggagttcaagaagagcaac
acacctgggaaggacggaggtggtttccttgagtctacagtcatgcctgttcttcgattt
ggattggacgctgccaacactttctttcaatataagctcatgaggggagcttttatgaag
tag
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