Salvelinus namaycush (lake trout): 120064297
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Entry
120064297 CDS
T07522
Symbol
edar
Name
(RefSeq) tumor necrosis factor receptor superfamily member EDAR isoform X1
KO
K05162
tumor necrosis factor receptor superfamily member EDAR
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120064297 (edar)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
snh04050
]
120064297 (edar)
Cytokine receptors [BR:
snh04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
120064297 (edar)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Death_EDAR
SCIMP
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
120064297
NCBI-ProteinID:
XP_038870684
UniProt:
A0A8U1F7D0
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Position
Sna19:29373136..29437824
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AA seq
515 aa
AA seq
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MERETFCLSGGKERDQGEATMKDRSREGVKMFQKGSQKESLFLCLLLVSCPPSLRSEYSS
CGEFEFYNQTLSSCQPCPPCQPGREPHMNCGYGTKDEDFVCVSCPPGKYSKGKYEICRRH
KDCEGLYRATVLKPGTPDNDADCGPCLPGYYIQENRPRNLYGMVCHSCQNAPRNTKECML
TKAVLSGKAPSVSTSSTTMFPHPHKDPTGQGHLATALIIAMSTIFIMAIAIVLIIMFYIL
KAKPSGQACCSGQVVKAVEAQTNKQEDKKDVPDNVVIFSEKDEFDKLKPTPPKTVKSEND
ASSENEQLLSRSMDSDEEAALERQGAADPNPSLCLLNLGTKPDICLLSLGLLNRDKTVSN
PTGPINANNISNANIINNNNYNKATGIQSRRKKILDLYARACNVAEGLSPTELPFDCLEK
ASRMLSSSYSSEAAVVKTWRHLAESFGLKRDEIGGMSDGLQLFERISTAGYSIPDLLTRL
VQIERLDAVESLCSDVLGGGDTHTVPLSSPRCASV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggagagagagacgttctgcctcagtggaggtaaagagagggatcagggagaggcgacg
atgaaagacagatcacgggaaggtgtgaagatgttccagaaaggaagtcagaaagagtct
ctcttcctctgtttgttattggtatcctgtcctccctctctcaggtcagagtacagtagt
tgtggagagtttgagttctacaaccagaccctcagtagctgccagccctgcccaccatgc
caacctggacgggagccccacatgaactgtggctatgggactaaggatgaggactttgtg
tgtgtgtcgtgtccgccggggaagtactcgaagggaaagtatgagatctgcaggagacat
aaggactgtgaaggtctgtaccgtgctacagtactcaaacctgggacaccagacaatgat
gcagactgtggaccctgcttacctgggtattacatccaggagaaccggcccaggaacctg
tatggaatggtctgtcactcgtgtcaaaatgcaccgcgcaacactaaagagtgcatgctt
accaaagctgtgttgtcaggcaaagcccccagtgtctcaaccagcagtaccaccatgttc
cctcaccctcacaaagaccccacaggacagggtcacctagcaaccgctctcatcatcgcc
atgtcaaccatcttcatcatggccatcgccattgtcctcatcatcatgttctacatcctc
aaagccaagcccagcggacaggcatgctgctctggtcaggtggtgaaggctgtggaggct
cagaccaacaaacaggaggacaagaaagatgttccagacaatgttgtaattttctctgaa
aaggatgaatttgacaaactcaaacctacgcctccgaagacggtgaaaagtgagaatgat
gcatcgtctgagaacgagcagctgttgagtcgtagtatggatagtgatgaggaggcagcc
ttggagaggcagggggcagctgatcctaaccccagcctctgtctcctgaacctgggaacc
aagccggacatctgcctgctttccctggggctcctcaacagggataagactgtatccaac
cccaccggccctatcaacgctaacaacattagcaatgctaacatcatcaataacaacaac
tacaacaaggctacagggattcagagccggaggaaaaagatcctggatctgtatgctaga
gcctgcaatgtggccgagggtctgagtcctacagaactaccatttgactgtctggagaag
gccagtcgtatgctgagctcctcctacagtagcgaggcagccgtggtgaagacctggaga
cacctggcagaaagctttggcctgaagagggatgagatcggagggatgagtgacggcctg
cagctgtttgagaggatcagtaccgccggctatagcatcccagacctgctcaccagactg
gtgcagatagagagactggatgctgtggagtcactatgttctgatgtactgggaggagga
gatacacacactgtccctctgtcctcaccacgctgtgcaagcgtctga
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