Salvelinus namaycush (lake trout): 120064303
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Entry
120064303 CDS
T07522
Symbol
aff3
Name
(RefSeq) AF4/FMR2 family member 3
KO
K15195
AF4/FMR2 family member 3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120064303 (aff3)
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120064303 (aff3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF4_int
DUF6857
Motif
Other DBs
NCBI-GeneID:
120064303
NCBI-ProteinID:
XP_038870709
UniProt:
A0A8U1F724
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Position
Sna19:30002882..30020583
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AA seq
1160 aa
AA seq
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MTHPHLAPHKSMLADDLKLSSDDDDADKGPEQSAPWFGNNSLSEQHTHTHGGRVRHSSSD
SSGSDSYSELEEESSSQRSLIPSPETHSDPGTPTDAQALGCTKEIYHPSTTQWQLDKWLK
KVPKKSSSCDQDPSNHDHAQRATEHRSLSPDPHRATSPSRPWGIREDYSPSQSPVPSPRF
NYSPRHSPRRSPGYSPCPSPSPSPCSSPCPSPTPRHSPIPSPVPSVCPSPFPSPRATCSL
SSIPQHPPRGPSPSLTHSSPRRYPQVRSPHQESHRPPTWPSLTTSPSHRPKIRPWIAPVP
STEPKSKPRHSPYPQPPPQHSSRPKSTQSQPVPTPKTTAKAAPALTTELSHRHKHRPRPS
PNSSPKLHSQPSLKHALTLAPKSQHLSNPRPSNGPSLTTRLSTRLSPTPRAKTLPTTDPS
RETSSRVSHCSKSSPKPHSLPNSKASSEPRAKSSPSPRPKVKSWAPAPHSKLPQRKPQSR
EREQEVDNRRETHAPKRKVDRQTEGKGEHEVERQTEKQGERQGKKQKERKGERQGERRLA
EEQLLRRPWVQSSEEEEEEDVEERKRRREESEKEERCKRRWEEQQQRGEWQAVQPKQRPH
TNSERRHHPIDPQRHGTKKKRRRKSEEERQSQPDPSPPPSPSSPTPVVPPTDSSSSSESD
SEPDLPPNVTKVPADSTSSQRPISRRGYQGPGRPADSRPRVLYPRRTTASNPGQGHQIQG
KQKLYTLVPFGRRELAAASHRGLRNLVVQIDLSLLNRVPDTTTGTPASHKHSSSSSASSK
QKEAMRHLCIPETERGDSKRKRKSENGVQHHRESKRSNSQTNGPFAHTESHRRLDPHSDT
RHNGFLEDYLDSTPLSDTADPTKPPIKTQNPEPKMEVECCVGVSGQPLPECEPWGPPLQR
AGGQRGTVTNHEPPHHAEYYMHEAKRMKHRADAMVDKLGKAVNYVDAALSFMECGKAMEE
GPLEAKSPYTMYAETVELIRYAMKLKNHSGPGARQEDQQLAVLCFRCLALLYWQMFRLKK
DHALKYSKALLDYFKSSPKVPTTLPIWSDSGKGTGGPPSSLSPSPSALTLGSHTGSSPSS
LISIPQRIHQMAANHLNITNSVLYSYEYWEVADSLARDNKEFFNYLNTLSGPLTLHSSIA
HAVQYTRQALQWIRISANVG
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgacccaccctcacctggcacctcacaaatccatgctcgctgatgacttgaagctcagc
agtgacgatgatgatgctgacaagggccctgaacagtcagccccctggtttggtaacaac
agtctgtcggagcagcacacacacacacatggtgggagggtgagacattccagctcagac
tcttcaggctcagactcctacagtgaattggaggaggagagcagtagccagcgctccctt
atcccaagcccagaaacacactccgatcctgggacacccaccgacgctcaggcccttggc
tgcaccaaggagatatatcacccctccaccactcagtggcagctggataagtggctgaaa
aaagtccccaaaaaatcctcttcctgcgaccaggatcccagcaatcacgaccacgcccag
agagctacagagcaccggtcgctctccccagacccccacagagccacatctccatccaga
ccctgggggatcagagaggactacagccccagccagagccctgttcccagcccgcgcttc
aactacagccccaggcatagccctcggcgtagccctggctacagcccctgccccagcccc
agccccagcccctgttccagtccttgtcctagccccaccccaagacacagtcccatccct
agcccggtccccagtgtctgtccaagccccttcccaagccccagagccacctgcagcctt
agttccattccccagcacccccctaggggtcctagtcctagccttactcattctagcccc
cgccgctatcctcaggttcggagtcctcatcaggaaagccacaggcctcccacgtggcct
agcctaacaaccagcccgagccatagacccaaaatcaggccctggattgcccctgtaccc
agcactgagcccaagagcaagccaagacacagtccatatcctcagcctccgcctcagcac
agctccaggcctaaatccacacagagccagcctgttcccactcccaagaccactgccaag
gcagcccctgctctgaccactgagctgagccacaggcacaaacacagacccaggcctagt
cccaactcgagtcccaagcttcattcccagcctagcttgaaacacgcactcactctagcc
cccaaaagccaacacctatccaaccccaggcccagtaatgggcctagtttgacaaccaga
ctcagtacccgtctcagtcccacacccagggccaagaccttacccaccacagaccctagc
agagagaccagcagcagagttagtcactgttccaaatccagcccaaagccacattctctg
cctaactccaaagctagttctgagcctcgcgctaaatccagccccagccctagacccaaa
gtcaagtcctgggcccctgctccccactcaaagcttccacagaggaagccccaatctagg
gagagagaacaggaggtggacaaccggagagagacccatgcaccaaagaggaaggtagac
aggcagacagagggaaagggggaacatgaggtagagagacagacagaaaaacaaggagag
aggcaggggaagaaacagaaggaaagaaagggggagagacagggagagagaagactggcg
gaggagcagttgcttagacgcccctgggtccagagctcagaggaagaggaggaagaggac
gtagaggagagaaagaggagaagggaggagagcgagaaggaggagaggtgcaagaggagg
tgggaggagcagcagcagagaggtgaatggcaagcggtccagcccaagcagagacctcac
accaacagcgagcgccgccaccatcccatcgacccacaacgccacgggaccaagaaaaag
aggaggaggaagagtgaggaagaaagacagtctcagccggacccttcccctccaccgtca
ccctcctcccccactcctgtcgtcccacccacagactcctcctcctcttcagagtccgac
tcggagcccgatctgcctcccaacgtcaccaaagtcccggccgactccacatcaagccag
cgtcccatctccaggagagggtaccagggcccggggaggcccgcggatagcaggcccaga
gtgctctaccccaggcgcaccaccgcatccaacccaggccaggggcaccaaatccaggga
aagcagaaactctacaccctggttccgtttggacgtcgtgagctggccgcagcctcccat
cgaggcctgagaaacttggtggttcagatagacctctccctgctcaacagagtgcctgat
actacgacaggcaccccagcctctcacaaacactcttcctcctcctctgcctcatccaag
cagaaagaagccatgagacacctgtgcatccccgagacagagagaggagacagcaagagg
aaacgcaagtcagagaatggagtccagcaccacagagagagtaagaggagcaactcccag
accaacggcccctttgcccacacagagtcgcacagacgtctagaccctcactcagacacc
agacacaacgggttcttggaggactatctggacagtacccctctctctgacaccgccgac
cccaccaagccccccatcaaaacacagaacccagagcctaagatggaggttgagtgttgt
gttggggtgtcagggcagcctctgcccgagtgtgaaccatggggacctcctttacaacgg
gcagggggacagagaggaaccgtaaccaaccatgaacccccacatcatgctgagtactac
atgcatgaagccaagaggatgaagcaccgtgcagatgccatggtggataagctggggaag
gcagtgaactatgtggatgctgctctctccttcatggagtgtggaaaagctatggaggag
ggaccactggaggccaagtctccctataccatgtacgcagagacagtagagctcatcagg
tacgccatgaagctgaagaaccactctggcccaggggctagacaggaagaccaacagttg
gccgtactgtgtttccggtgccttgctctcctatactggcagatgtttcgtctaaagaag
gatcacgccctgaagtattccaaagctctattggactactttaagagttctccaaaagtg
cctactactctcccaatctggagcgactcgggaaagggcacagggggacctccctcgtcc
ctctcccccagcccctcagccctcaccctgggctctcacactggcagctccccctcctcc
ctcatcagcattccccaacgtatccaccagatggcagcaaaccacctcaacatcaccaac
agtgtcctctacagctatgagtactgggaggtagcagatagccttgccagagacaacaag
gagttctttaactacttgaacaccctgtcggggccattgactctccacagtagtattgct
catgcagtccagtacaccagacaggctctacagtggatacgcatcagtgccaatgtgggt
tag
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