Salvelinus namaycush (lake trout): 120064328
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Entry
120064328 CDS
T07522
Name
(RefSeq) probable ubiquitin carboxyl-terminal hydrolase FAF-X isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120064328
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120064328
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120064328
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120064328
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120064328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
RasGEF_N
FAST_1
Motif
Other DBs
NCBI-GeneID:
120064328
NCBI-ProteinID:
XP_038870752
UniProt:
A0A8U1H6U7
LinkDB
All DBs
Position
Sna19:31411941..31500684
Genome browser
AA seq
2639 aa
AA seq
DB search
MTATTRGSPVGGNDNQAGQAPDAQSQSQPPLPQNQTSSPNSTNENSPVSPPDEQGQGDAP
PQLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIELSKKGLDVKCEACQ
RFFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMA
TNPHCKFHIYNGTRPSETVPAGVQLADDELFARPPDPRSPKGWLVDLINKFGSLNGFQTL
HDRFIGGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPIIEMVPQFLENLTDEELKKE
AKNEAKNDALSMIIKSLKNLASRVPGQEETVKSLEIFRLKMILRLLQISSFNGKMNALNE
VNKVISSVSYYTHRHGNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKIL
RFVIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWT
NASKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILD
YSCSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKIPINIQT
NLAGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKAEQAEFDPQTVR
AGSRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSK
LMGDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMM
DDLELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRL
KASYDTLRVLDGDKDSINSARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRG
KHITLTVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILTRIKANATHTKIELFIGGDVVDP
ADDRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHFSDGPNPEVE
SCLPGVIMSLHLRYISFLWQVADLGCGINMPLLRDGARVLMKLMPPDNSTVEILRAVCLD
HAKLGENSLSPTLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGL
PLVLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKGVAEACQPNAEGTIP
VSPINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDENFFQASKYIPDICVI
RAVQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEIMTLCFSLL
PTALDTLSKEKAWQTFIIDLLMHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLLFT
VLGSTAKEQATHAGDYFTLLRHLLNYAYNSNINLPNAEMLLNNEIDWLKRIRDEVKRTGE
TGVEETILEGHIGITKELLAFQTSEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQYMK
SGEFPTEQAIPVCSSPASINAGFELLVALAVGCVRNLKQMVDTLTDMYYLGCEALTEWEY
LPPVGPRPTKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGDEK
QENESNVDPRDEVFNYHHQFDDKPSLSKSEDRKEYNIGVLRHLQVIFGHLASSRLQYYIP
RGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKIC
QGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKRL
LIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPEN
QVIQQNEPSEPEPPGSSKYRLVGVLVHSGQASGGHYYSYITQRNVGGADGERNRWYKFDD
GDVTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKD
SELVKYIQELTISSSSNNKPSHQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFVKKLL
TCNSVYLNPPPGQDHLLPEAEEMAMISVQLAAKFLFSTGFHTKKVVRGPASDWYDALCIL
LRHSKNVRYWFAHNFLFAYANRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPT
ASPVGASTQPQACDNLSLSDHLLRTVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKT
QLLKLSVPATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVAARMQSSINGNPP
LPNPYGDANQTTPVMPVQQLVGEILFVRTSYVKKIIEDCSNSDETVKLLRFSCWENPQFS
STVLSELLWQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQ
RSKNHYQKRAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGN
PQYTYNNWSPPVQSNETSNGYFLERSHSARMTLAKACELCPEECHLTKHGEAVSEEDAAM
RKSSSPQQLLPGEGTGQQHTEPDDQEPPEDQDTSPPDDISLYPHSSPGTTTQFQQQNNHP
HGQPYTGPAAQHMNNPQRPGPVPSSAPVPGPAPGTGPQAQDNWESTEEVPSVAPAPPKE
NT seq
7920 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccactcgtggctctcctgttgggggcaacgacaaccaggcaggccaggca
cccgacgctcagagtcagagccagcccccgctgccacagaaccagacgtcgtcccctaac
tccaccaatgagaactctccagtgagccccccggatgagcagggtcagggggacgccccc
ccccagctggaggaggaggagccggccttccctcacacagacctggccaagctggatgac
atgatcaacagaccccgctgggttgttccagttcttccaaagggagagttagaggttctt
ctagaagctgctatagagcttagtaaaaaaggacttgatgtgaagtgtgaggcgtgccag
aggtttttccgagatggcctgaccatctccttcaccaagatccttacagacgaggccgtc
agcgggtggaagtttgagatccataggtgtatcatcaacaacacacaccggctggtggag
ctgtgtgtggccaagctctctcaggactggttccccttgctggagctgctggccatggcc
accaacccccactgcaagttccacatctacaacggcacacggccctctgagacggtgcct
gccggggtgcagctggccgatgacgagctcttcgcccgcccccctgaccctcgctccccc
aagggctggttggtggatttaataaacaaatttggctcgttaaatgggtttcaaacactg
cacgatcgcttcataggtggccaagcactgaacgtccagatcatcgccgcacttatcaag
ccttttgggcagtgttacgagttcctcacattgcacacggtgaagaagtacttcctgccc
atcatcgagatggttcctcagtttctggagaacctgacagatgaggagctgaagaaggag
gccaagaacgaagccaaaaatgacgccctgtccatgatcatcaagtccctgaagaacctg
gcctccagggtgcctgggcaggaggagaccgtgaagagcttagagatttttaggttaaaa
atgattcttaggttattgcaaatttcctcttttaatggcaaaatgaatgcactaaatgaa
gtaaacaaggtaatctcaagtgtgtcctactacacacatcgacatggcaaccctgaggag
gaggagtggcttactgcagaacgcatggcggagtggatccagcagaaccacatcctgtcc
atcgtgctgagggacagtctgcaccagcctcagtacgtagaaaaactagagaagatactt
cgcttcgtcatcaaagagaaagctcttaccatgcaggacctggacaacatctgggctgca
caggctggtaaacatgaggccatcgtgaagaacgtccacgacctcctggccaagctggcc
tgggacttctctcctgagcagctcgaccacctctttgactgcttcaaggcgagttggacg
aacgctagtaagaagcagcgtgagaagctgctggagctgatccgtcgtctggcggaggat
gacaaggatggagtgatggcccacaaggtgctgaacctgttgtggaacctggctcacagc
gatgacgtgcctgtagacatcatggaccaggccctcagtgctcacatcaagatactggac
tacagttgctctcaggatcgagacacgcagaagatccagtggatcgatcgcttcatagaa
gagttgcgcaccaatgacaaatgggtgattcctgcactaaagcagatccgagagatctgt
agcctgttcggagaggctcctcagaatctcagaaagaaaattcctattaacatacaaacg
aacttagcgggtcagacccagaggagtcctcatgtgttctatcgtcatgacctgatcaac
cagctccaacacaaccatgctctggtcacgctggtggctgagaacctttctgcctacatg
gagaccatgaggcagttctctaaagccgagcaggcagagtttgacccccagacggtgagg
gcagggagccgctacagccacgtacaggaagtccaggagagactcaacttcctgaggttc
ctgctgaaggatggccagttgtggctctgtgctcctcaggccaaacagatctggaagtgc
ctggccgaaaacgctgtcttcctatgtgatagagaggcctgcttcaaatggtactccaag
ctgatgggagatgagccagacctggacccagacattaacaaggacttctttgagaacaac
gtactccagctggacccatctctgctcacagagaacggcatgaagtgcttcgagaggttc
ttcaaggctgtcaactgccgggagggaaagctggtggccaaacgcagggcctacatgatg
gacgacctggagctcataggactggactacctctggagggtcgtaattcaagggagcgat
gacatcgctagtcgagccatagacctgctgaaagagatctacaccaacctcggaccaaaa
ctacaagtcaatcaggtagagatccacgaggatttcatccagtcgtgcttcgaccgtctg
aaggcgtcgtacgatacgctgcgtgtcctggacggggacaaggacagcatcaactcggcc
cggcaggaagccatccgcatggtccgcgtgctcactgtgctcaaggagtacatcaacgag
tgtgacagcgactaccacgaggagaggaccatactgcccatgtccagggcgttccggggg
aagcacatcacgttgaccgtgcgtttccctaaccagggccgtcaggtagatgacctggac
atctggtctcacaccaacgacaccatcggctcggtgcgccgtggcatcctcacacgcatc
aaggccaacgccacgcacaccaagatagagctcttcattggcggggatgtcgtcgacccg
gccgatgacagaaagctgattggccagctcaacctcaaagacaaaacgttgatcacagcc
aagctgacccaggtgagtgccaacatgccatccagcccagacagctcctctgactcttcc
accggctcacctggtaaccacggcaaccacttcagcgacgggcccaacccagaggtggag
agctgtctccctggagtgatcatgtctctccacctgcgctacatatctttcctgtggcag
gtagcggacctgggctgtggcattaacatgcctctgttacgagatggagccagggtactc
atgaagctaatgcctccagataacagtactgtggagatcctgcgtgccgtgtgtctggac
catgccaagctgggagagaacagcctcagccccacactggactcgcgcttctttggcccc
tcgccatcacaagtcctctacctcatagaggtggtgtatgccctactcatgccagccagc
gccacattgggggaggatgccagcgacttccagtacaacttcctgaagagtggcgggctg
cctcttgtactgagcatgctcacacggaacaacttcctgccttcggccgacatggagaca
cggcgaggggcgtacctcaacgctctgaagatcgccaagctgctgctcaccgccgtgggg
ttcggacacgttaaaggtgtggccgaagcctgccagcccaatgctgaggggaccatacca
gtctcaccgatcaaccaggccactcatgaccaagcccttgtcctccagagtgccctgcaa
aacatccccaaccctgcctcagagtgtatgctccgcaacgtagctatacgcctggctcag
cagatctctgacgagaacttcttccaggcgtccaagtacatcccagacatatgtgtgatc
cgggcggtgcagaagatagtgtgggcgtcgggctgcggcaccgtacagctagtctttagc
tccaacgaagagatcagcaagatctacgagaagacgaatgcggctaaggagccggacggg
gaggatgagcaggtgtgttgtgaggccctggagatcatgaccctgtgtttctccctgctg
cccaccgctctggacacactcagcaaggagaaggcctggcagaccttcatcatagacctg
ctaatgcactgccacagcaagtcagttcgtcagatggcccaggagcagttcttcctcatg
gccaccaggtgttgcatgggccatcgaccccttctcttcttcatcaccctcctcttcact
gtgctggggagcaccgctaaggagcaggccacgcatgctggggactacttcaccctgctc
aggcacctcctgaactacgcctacaacagcaacatcaacctgcccaacgcagagatgctg
ctcaacaatgaaatcgactggctcaagaggatcagggatgaggtaaagaggacaggggag
acgggcgtagaggaaaccatcctggaaggccacatcgggatcaccaaggagctgctggcc
ttccagacatcagagaagaagtactacatcggctgtgagaagggaggagccaacctcatc
aaggagttgatagatgacttcattttcccagcatcgaatgtgtacctgcagtacatgaag
agtggggagttccccacggagcaagccatccctgtctgtagcagccccgcctctatcaac
gcaggcttcgagctgctggtggcgctggcggtgggctgtgtccggaatctaaagcagatg
gtcgacacgctcactgatatgtactacctaggttgtgaggctctgacagagtgggagtat
ctccccccggtgggaccgaggcccactaaaggctttgtgggactgaagaacgccggagcc
acctgctacatgaactcagtcatccagcagctctacatgatcccgcccatacgcaacggc
attctggccatcgagggcaccggcaccgatgtggacgatgacatgtccggtgatgagaag
caggagaacgagagtaatgtggacccacgagatgaggtgttcaactaccaccaccagttt
gacgacaagccatcgctcagtaagtcggaggacaggaaggagtacaacatcggggtgctg
cgccacctgcaggtcatctttggccacctggcctcctccagactgcagtactacataccg
agaggcttctggaaacagttcaggttatggggtgagccggtgaacctgcgagagcagcac
gatgccctggagttcttcaactctctagtggacagtctggacgaggctctgaaagccttg
ggtcacccagccatgctcagtaaggtgctgggtggatcctttgctgaccagaagatctgc
caggggtgcccacataggtatgagtgtgaggagtcgttcaccactctgaatgtagacatc
aggaaccaccagaacctgttggactcaatggagcagtacgtcaaaggagacctgctggag
ggtgctaacgcataccactgtgagaagtgcaacaagaaggtggacacagtgaagcggctg
ctgatcaagaagcttcccccagtgctagccatccagctgaagaggtttgactacgactgg
gagagggagtgtgccatcaagttcaacgactactttgagttccccagggagctggacatg
gagccctacacagtagccggggtggccaagctggagggggacgacgtcaacccagagaac
caggtgatccagcagaacgagccctctgaaccagagcccccaggcagctccaagtaccgc
ctggttggggtgctggtccactcaggccaggccagcggcggacactactactcctacatc
acacagaggaacgtgggtggggcagacggcgagcggaaccgctggtacaagtttgacgac
ggcgacgtgacggagtgcaagatggacgacgaggaggagatgaagaaccagtgcttcgga
ggggagtacatgggcgaggtgtttgaccacatgatgaagaggatgtcgtaccggcgtcag
aagcgctggtggaacgcatacatcctcttctacgagcggatggactcactggacaaggac
agtgagctggtcaaatacattcaggagctgaccatctcgtcctcgtccaacaacaagccg
tcgcaccaggtcaagatgcccggtgtaatcgagtgcagtgtgcgcaagcagaacgtgcag
ttcatgcacaatcgtatgcagtacagcctggagtatttccagtttgttaagaaacttctg
acctgtaacagtgtctatttaaaccctccgccaggacaagaccatctactgcctgaggcg
gaggagatggctatgattagtgttcagctggctgctaagttcctcttcagcactgggttc
cacaccaagaaagtagtgagggggcctgccagtgactggtatgatgcgctttgcatccta
ctgagacacagtaagaatgtacgctactggtttgcacacaacttcctgtttgcctacgcc
aaccgcttctctgagtacctgctggagtgccccagtgccgaggtccggggcgcgttcgcc
aaacttatcgtcttcattgcacacttctccctgcaagacggaccctgcccctcccccact
gcctctcctgtcggagcctccacccaaccacaggcatgtgataacctgagtctcagtgac
cacctgttgaggactgtgttgaacctgctcaggagagaggtgtcagagcacggccgacac
ctgcagcagtacttcaacctcttcgttatgtatgccaacctggggctggcagagaagacc
cagttgttgaagctgagtgtcccagctaccttcatgctggtggctctagacgaggggcct
ggccctcccataaagtaccagtatgctgaactaggcaaactgtacaccgtagtctcccaa
ctggtgcgctgctgtgacgtggccgcgcgcatgcagtcctccatcaatggtaacccccct
ctccctaacccgtacggggatgccaaccagaccaccccggtgatgcctgtgcagcagctg
gtgggagagatcctgttcgtaaggaccagctacgtgaaaaagatcattgaggactgcagc
aactcagatgagacggtcaagctgctgcgcttcagctgctgggaaaacccccagttctcc
tccactgtactatcagagctgctctggcaggtggcgtactcgtacacctacgagctgagg
ccttacctggacctgctgctgcagatcctgctcattgaggactcctggcagactcacagg
atccacaacgtgctgaagggtataccagatgacagggatggcctatttgacaccatccag
cgctccaagaaccactaccagaaacgggcctaccagtgtatcaagtgcatggtagccctc
ttcagcaactgctctgtggcctaccagatactacagagtaacggggatctgaagcgtaag
tggacgtgggcagtggagtggctaggtgacgagctggaaaggaggccctacacagggaac
cctcagtacacctacaacaactggtctcccccagtccagagcaacgagacctccaacgga
tacttcctggagcgctcgcactccgcacgcatgaccctggccaaggcctgtgaactctgc
cctgaggagtgtcacttaacgaagcacggtgaggcggtgtctgaagaagacgctgccatg
cggaaatcgtcctcgccacagcagcttttgccaggggaagggacaggacagcagcacact
gagcccgatgaccaggaaccccctgaagatcaggacacctcccctccagatgacatctcc
ctctaccctcattcgtctccagggactacgacacagtttcagcagcagaacaaccacccc
cacgggcagccgtacacaggcccagctgcccagcacatgaacaacccccagcgccccggc
cctgtcccttcctctgctccagtcccaggccctgcgcccggcacaggcccacaagcacaa
gacaactgggagagcactgaggaggtcccctccgtggcccctgctccgcctaaggagtaa
DBGET
integrated database retrieval system
