Salvelinus namaycush (lake trout): 120064379
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Entry
120064379 CDS
T07522
Symbol
stxbp5l
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120064379 (stxbp5l)
Membrane trafficking [BR:
snh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120064379 (stxbp5l)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
120064379 (stxbp5l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_RIG_2nd
WD40_Prp19
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_WDR19_1st
Lgl_C
Beta-prop_VPS8
Beta-prop_NUP159_NUP214
Beta-prop_DCAF4
Synaptobrevin
PEP5_VPS11_N
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
120064379
NCBI-ProteinID:
XP_038870848
UniProt:
A0A8U1F6P0
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All DBs
Position
Sna19:complement(36806763..37046130)
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AA seq
1175 aa
AA seq
DB search
MKKFRKVLDGLSSSSPGGVASPSCGSAAGTPTAHAPTPQDIHVQETLVSENFQICKTVRH
GFPYQPTCLAFDPVQKILAIGSRTGGIRILGRPGVDCYSQHESGAAVLQLQFLINEGALV
TACADDTLHLWNLRQRRPAILHSLKFNRERITFCHLPFQSKWLYVGTERGNTHIVNIESF
VLSGYVIMWNKAIELATKAHPGPVVHLSDSPKDEGKLLIGFESGTVVQWDLRAKKVDFRI
YYDEAIHSVSWHHEGKQFMCSHSDGSLTMWNLRNTARPIQITYPHGKILKDGRKESCKPI
LKVEYKTSRNSEPYVIFSGGLSYDKSGGRRPTLTIMHGKAITVLEMDHPIVEFLVLCDTP
YSNEVQDPYAVVVLLEKDFIVVDLTQSNFPIFENPYPMDIHESPVTCTAYFAECPPDIIP
ILYSIGAKQKKTGYSHKEWPVSGGTWTLGSQTYPEIIVTGHADGTVKFWDASAITLQMLY
KLKTSKVFEKPKVGEGRMGELVEEDPYAVQMVSWCPQSRLFCVVGISAHVILYRFSKHDA
NTQIVSLEVRLQFDSEDVISPSEAENNPCFSDPSSHSPQPPGSPGSGTQDSLPCLKVKNR
PVRMPPGYQAELVVQLQWVDGEPPQQITSLDINSAYGLLAFGNCNGLTVVDFLQKTILMC
MGTLDLYGAADPYQRLTRSPRKNRQSTSDFCMRGLSHFYSDSKKRIRTSYQSLTELSDNQ
VSMDMERSKSPTSDHVNGHCTSPTSQPCSVGKPRITGVPEGPRLTRRGPGRPPFRKAQSA
ACMEISLPVSSHTEESRENSFSRSRSSSVSSIDRDTKESVTTLQFGESCGRKGDALPTAC
LWVGTSLGVVLLLPISIPTEEEERMEEPITMGPSGTVLMLKGSVLRFAFLDCGGALIQSP
YEVWRDPNGPEDPDRPRRRKLVNFSPSSSQEACSDGHLAIVCSEKQAKVILMPTQAVLFT
HNITESSFLLRADVVSVCNSVCLACFCANGHIMTLSLPSLRPLMDINYLPLTDLRIARTF
VFTNGGQALYLSSPTEIQRLTYSQEMTDNLQDMLGELFTPIETPEAQNKGFLKGFFGGNA
QTFDREELFGEAAAGKASRSLAQHIPGPMGLENMKTAAGGVVGDLARARIALDQRGERLG
ELEERTALMMNSAETFSTHAHQVMLKQKDKKWYQL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttcgaaaggtactggacggcctgtcatcctcctccccggggggtgtcgcg
tccccgtcgtgcggcagtgcagctggtactccgaccgctcatgcgcccactccccaggat
atccatgtccaggagacgctagtctcggaaaactttcagatatgcaagacggtgcgccat
ggcttcccgtaccagcccacctgcctggccttcgatcctgtccagaagatcctggccatc
ggctccagaacaggaggcatacggatcctgggacggcctggtgtggactgctatagccag
catgaaagtggagccgctgtcctccagctacagttcctcatcaacgagggggcgctggtt
acggcatgtgcagacgacacgctacatctgtggaaccttcgccagagacgcccagccatc
ctgcactcgcttaaattcaacagggagaggatcactttttgccacctccccttccagagt
aaatggctgtacgtgggcacagagcgtggcaatacacacatcgtcaacatcgagtccttc
gttctgtctggatacgtcatcatgtggaacaaggccatagaattagcaactaaagcacat
ccagggcccgtggtccatctgagtgacagcccgaaggatgaaggcaagttgctgataggg
tttgagagtggaacagtagtccagtgggacctccgagccaagaaggttgacttcagaatc
tactacgatgaggctatccattctgttagctggcatcatgaggggaagcagttcatgtgc
agccactcagatggcagcctgactatgtggaacctgagaaacacagccaggcccattcag
atcacctaccctcacgggaagatactgaaggacgggaggaaagagtcgtgtaagcccatc
ctcaaggtggaatacaagacctccaggaacagtgagccctatgtcattttctctgggggt
ctgtcatatgacaagtccggtggaaggaggcccaccctgaccatcatgcacggcaaggcc
atcacggtgctggagatggaccaccctattgtagagttcctagtactctgtgacacccca
tactccaacgaggtccaggatccttatgcagtggttgtgcttttagaaaaggacttcatc
gtggtggatctgacacagagcaacttccccatctttgagaacccctacccaatggacatc
cacgagtctcctgtcacctgtacggcttacttcgctgaatgccctcctgacatcatcccc
atcctctactccataggggccaagcagaagaagactggctacagccacaaggagtggcca
gtgagcggtggcacatggacactaggctcacagacctacccagagatcatcgtcacagga
cacgcagacggaaccgtaaagttttgggacgcctctgctattacactgcagatgctgtac
aagctgaagacgtccaaggtgtttgagaagcccaaggtgggagagggtcggatgggcgag
ctggtagaggaggacccctacgccgttcagatggtcagctggtgcccacaaagccgtctc
ttctgtgtggtgggcatttctgcccacgtcatcctctaccggttcagcaaacatgacgcc
aacacacagatagtgtcactagaggtgcgtctgcagtttgattcggaggacgtcatttcc
ccgtcagaggcagagaacaacccgtgtttctcggaccccagctcccactccccccagccg
cccggtagccctggcagtggcacacaggacagcctcccctgcctcaaggtgaagaatcgt
ccagtgcggatgcccccggggtaccaggctgagttggtggtgcagctgcagtgggtggat
ggagaacccccccagcagatcaccagcctggacatcaactctgcctacggcctcctagcg
tttgggaactgtaatgggctcacggtggtggacttccttcagaagacgatcctgatgtgt
atgggcacactggacctgtacggagccgcagacccctaccaacgactcacacgctcccca
cgcaagaacagacagtccacctcagacttttgcatgcgcggcctgtctcacttttattcc
gattcaaagaaaaggatccgtacgtcctatcagagccttacagaactctccgataaccag
gtatccatggacatggagagaagcaagtcacccacctcagatcatgtcaatggacattgc
actagtcccacctcccagccctgctccgtggggaagcctcgcatcacaggggttcccgag
ggcccgcggctcacccggagagggcctggccgaccgcccttccgcaaggcccagtccgcc
gcttgcatggagatctctttgcctgtttcctcccacacagaagaaagtagagagaactca
ttcagtcgctcgcggagctccagtgtgtccagcatcgatcgcgacaccaaggagtcagtg
accacgttgcagttcggagagtcctgcggccgtaagggcgatgctctgcctaccgcctgc
ctgtgggtgggcaccagcctgggcgtggtcctgctcctgcccatatccatccccacagaa
gaggaggagaggatggaggagcccatcaccatggggcccagtggtaccgtcttgatgcta
aaaggctctgtgttgcgatttgccttcctggactgtgggggcgctctcattcagagtccc
tacgaggtgtggcgggaccccaacggtcccgaagaccccgaccggccccgcaggcgcaag
ctggtcaacttctccccgtcatcatcccaggaggcgtgcagtgacggtcacctggccatt
gtgtgctctgagaagcaggccaaggtcatcctcatgcccacccaggctgtcctgttcacc
cacaacatcaccgagtcctccttcctcctgcgggctgacgttgtctccgtctgcaacagc
gtctgcctcgcctgcttctgcgccaacggacacatcatgaccctaagtttgcccagtcta
agacccctgatggatatcaactaccttcccctgaccgacttgcgtatcgcccggaccttt
gtcttcactaacggaggccaggccctgtatctgagctctcctacagagatacagcgcctc
acatacagccaggagatgacggacaacctacaggacatgctgggggagctgttcactcct
atagaaacaccagaggcccagaacaaaggattcctcaagggcttcttcgggggcaatgcc
cagaccttcgacagagaggagctgtttggggaggcagcagcgggtaaggcctctcggagt
ttggcccagcacatccctggtccaatgggattggagaacatgaagactgcagccggcggc
gtcgtgggggacctggcccgagcccgcatcgccctggaccagagaggagagaggctgggc
gagctggaggaacgcaccgccctcatgatgaacagcgccgagaccttctccacacacgcc
caccaggtgatgctgaaacaaaaggacaagaaatggtatcagctttaa
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