Salvelinus namaycush (lake trout): 120064381
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Entry
120064381 CDS
T07522
Symbol
gtf2e1
Name
(RefSeq) general transcription factor IIE subunit 1
KO
K03136
transcription initiation factor TFIIE subunit alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120064381 (gtf2e1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
snh03021
]
120064381 (gtf2e1)
Transcription machinery [BR:
snh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIE
120064381 (gtf2e1)
Prokaryotic type
Archaeal type
TFE
120064381 (gtf2e1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIE_alpha
TFIIE-A_C
Zn_Ribbon_TF
Cas12f1-like_TNB
Motif
Other DBs
NCBI-GeneID:
120064381
NCBI-ProteinID:
XP_038870850
UniProt:
A0A8U1F7D2
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All DBs
Position
Sna19:complement(37094630..37140484)
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AA seq
454 aa
AA seq
DB search
MSEPELLTEVPASLKRLAKQVVRGFYGVEHALALDVLIRNPCVREEDMLELLKFDRKQLR
SVLNTLKGDKFVKCRMRVETAPDGKTTRHNYYFINYRLLVNVVKYKLDHMRRRIETDERD
STNRASFRCPCCFSTFTDLEANQLFDPMTGTFRCTFCQTEVEEDESAVPKKDARTLVARF
NEQIEPIYVLLRETEDVHLSNDLLEPEPAEIPALKQSRDRAAAAAGAAAGGPHREAWSTK
GSSYADLYTQNVEISMGEQEEQQRKQASEGKAPRERPVWLTESTVHGGTYSEPDPLKNSG
DDAGGAQVGVAGLGGGQSDENEEVMRALLIHEKRSGAGPAGGGAVAAARALTSSSAARGS
DSESDTSESDEDAPTAPPPVAAAQRRPTGMEMEEEDDDDEFEEVGDDESMVMVGGRSFSY
REVSQRPELVEKMSSQEKEAYIEMGQNIFQEMYF
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagccagaattattaacagaggtccctgcttcgctgaagcgcctggccaagcag
gtagtgcggggcttctacggggtggagcatgccctggctctggacgttcttatccgcaac
ccctgcgtccgagaggaggacatgctggagctgctcaagtttgaccgaaagcagctgcgc
tcggtgctcaatacgctcaagggcgacaagttcgtcaagtgccgcatgcgggtggagacg
gctcccgacggcaagaccacgcgtcacaactactacttcatcaactaccgactgctggtc
aatgtggtgaagtacaagctggatcacatgcggcggcgcatcgagacggatgaaagggac
tccaccaacagggcgtcgttccgctgcccctgctgcttcagcaccttcactgacctggag
gccaatcagctgtttgaccccatgaccgggacgtttcgctgtacgttctgtcagacggag
gtagaggaagacgagtctgcggtgcccaagaaggatgccaggaccctggtggcccgtttc
aacgaacagatcgagcccatatacgtgctgctgcgtgagaccgaggacgtccacctatca
aacgacctgctggagcccgaacctgccgagatccctgccctcaaacagagtcgagaccgt
gcggcggcggcagcgggtgcagcagctggcggtccccaccgcgaggcctggtccaccaag
ggctcgtcctacgccgacctgtacacccagaacgtggagatcagcatgggggagcaggag
gagcagcagcgcaagcaggccagcgaggggaaggcacctcgggagagacccgtgtggctg
acagagagcactgtgcatggaggaacgtacagcgagccagacccactcaagaactccgga
gacgacgcgggaggagcccaggtgggtgtggccgggctcggcggcggccaatcggacgag
aacgaggaagtgatgcgcgccctgctcatccacgagaagaggagcggtgccgggccggca
ggaggcggagccgtagcggcagccagggcactcacctcctcatcagcagccaggggcagc
gactcggagagcgacaccagcgaatcagacgaggacgctcccacggctccgccgcctgtg
gctgcggcccagcggcggccgactggcatggagatggaggaggaggatgatgatgacgag
tttgaggaggtgggggacgatgagtccatggtgatggtggggggacggtccttctcctat
cgggaggtgagccagagaccagagctagtggagaagatgagctctcaggagaaagaggcc
tacatcgagatgggacagaacatcttccaggagatgtacttctga
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