Salvelinus namaycush (lake trout): 120064391
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Entry
120064391 CDS
T07522
Name
(RefSeq) dynein, cytoplasmic 1, intermediate chain 2a
KO
K10415
dynein cytoplasmic 1 intermediate chain
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04145
Phagosome
snh04814
Motor proteins
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120064391
09142 Cell motility
04814 Motor proteins
120064391
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120064391
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120064391
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120064391
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Motor proteins
Dynein complex
120064391
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
120064391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Dynein_IC2
Beta-prop_EML
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_SPT8
Beta-prop_IP5PC_F
Beta-prop_WDR11_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
120064391
NCBI-ProteinID:
XP_038870867
UniProt:
A0A8U1F7I2
LinkDB
All DBs
Position
Sna19:complement(37762086..37785774)
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AA seq
610 aa
AA seq
DB search
MSDKSELKAELERKKQRLAQIREEKKRKEDERKKKEADLKKDAAPLDDSDLEKKRRETDA
LLQSMGITSADVPVVPPPMSPTSKSVGTPSEAGSQDSGDGAVGSRRGPLKLGMAKITHVD
FPPKETVSYTKETQTPVTTQQKEEEDEEEEEEIAPPQPVLEIQTEKPDQKEEEEAPPQEL
TEEEKLQILHSEQFITFFDHSTRIVERALSQHVDVFFDYSGREMEEKEGEIQAGAKLFLN
RQFVDERWSKHRVVTCLDWSPQYPELLVASYNNNEEAPHEPDGVALVWNMKYKKNTPEYV
FHCQSAVMSAAFARFHPNLVVGGTYSGQIVLWDNRSNKRTPVQRTPLSAAAHTHPVYCVN
VVGTQNAHNLISISTDGKMCSWSLDMLSQPQDSLELVFKQSKAVAVTSMSFPLGDVNNFA
VGSEDGSVYMACRHGSKAGISEMFEGHHGPITGIDCHTATGPVDFSHLFVTSSFDWTVKL
WSTKNNKPLYSFEDNSDYVYDVMWSPTHPALFACVDGVGHLDLWNLNNDTEVPTASTTVE
GNPALNRVRWAHSGKEIAVGDSDGQILVYDVGEQIAVPRNDEWTRFVRTLAEINENRDDA
EELAAQRLSA
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacaaaagcgagctgaaagcggagcttgaacggaagaagcaacgcctggctcag
atcagggaggagaaaaaaaggaaggaagatgagcgcaaaaagaaagaggctgacctgaag
aaagatgccgccccactggatgactcggatttggagaaaaagagacgtgagacagatgcc
cttctgcagagcatgggcatcacatcagctgatgtccctgttgtccctcctcccatgtct
ccgacctccaaatctgtgggcacaccaagcgaagcagggagccaagactcgggcgacggc
gccgtgggatccaggcgtggacctctgaagctgggcatggccaagatcacccatgttgat
ttccctccaaaagagacggtgtcgtacaccaaggagacccagacgcctgtgaccacccag
cagaaagaagaggaagacgaggaggaggaggaggagattgctccaccacaaccagtgctt
gagatccaaacggagaaaccagaccagaaagaggaggaggaagcacctccacaagagctg
actgaggaggagaagctgcagatcctccactctgagcagttcataaccttctttgaccac
agcacccgcatcgtggagcgggccctgtcccaacacgtggacgtcttcttcgactacagt
ggtcgcgagatggaggagaaggaaggtgagatccaagctggggccaagctgtttctgaac
agacagtttgtggatgagcgctggtctaagcatcgcgtggtcacctgtctggactggtcc
cctcagtatcctgagctgctggttgcctcatacaacaacaacgaggaagccccccacgag
ccggacggggtggccctggtctggaacatgaagtacaagaagaacactccggaatacgtc
ttccactgccagtctgcagtgatgtcggccgcctttgccagattccaccctaacctggtg
gtggggggcacctactcggggcagatcgttctgtgggacaacaggagcaacaagaggacc
cccgtgcagaggacccctctgtcagcagcagcacacacgcacccagtgtactgtgtgaac
gtggtgggcacccagaacgcccacaacctcattagcatctctaccgatggcaagatgtgt
tcctggagcctggacatgctgtctcaaccgcaggacagcctggagctggtgttcaagcag
tcgaaggccgtcgctgtcacctccatgtctttccccctcggagatgtcaacaactttgcg
gtggggagcgaggacgggtccgtctacatggcgtgtcgtcatggaagtaaagcagggatc
agtgagatgtttgagggccaccacgggcctatcacagggatagactgtcacacagcgacc
gggcctgttgacttctcccatctgtttgtcacctcctcctttgactggaccgtcaagctg
tggagcaccaagaacaacaagccactgtactcgttcgaggacaactcggattacgtctat
gacgtcatgtggtcccccactcacccggctctgtttgcgtgtgtggatggagtgggccat
cttgatctgtggaacctcaacaacgacactgaggttcctacagccagtaccacagtggag
gggaacccagccctgaaccgcgtgcgctgggcccactctggcaaagagatagccgtggga
gactctgatggacagatcctggtctatgatgttggagagcaaatcgctgttccacgcaac
gacgagtggacccgctttgtccgaaccctggcggagatcaacgagaaccgggatgatgcc
gaggagcttgccgctcagcgcctctctgcctga
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integrated database retrieval system
