Salvelinus namaycush (lake trout): 120064518
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Entry
120064518 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120064518
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120064518
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120064518
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120064518
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-rbx1
WWE_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_Vps41
zf-RING_5
zf-ANAPC11
zf_RING_Vps8
PHD_NSD
zf-UDP
Motif
Other DBs
NCBI-GeneID:
120064518
NCBI-ProteinID:
XP_038871077
UniProt:
A0A8U1F727
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All DBs
Position
Sna1:complement(21505930..21566776)
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AA seq
643 aa
AA seq
DB search
MARPGSGVLVSVNGLGYPPQNLARVVVWEWLNEHGRWRPYNVTTCHHIENVLKGDTRGTV
VLGQVDAQLAPYVIDLQSMHQFRQDTGTMRPVHRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMVQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQHRKLYGGATGPSGATGTH
TFAGTTLWSPTSSAGTNNIQHNNISAGGGQAKAEQVQSLLSSANFPCSPALPSLPPAHGH
SHAHAHSHSHHAIINGQNNLNRPGTQRISMGTARGAIPPGVPPLPVKNLTVSGPVHPAIA
GMTGILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGVNGIRRKTKKKHLRRGKNPED
VVRRYTEKVKVAPDEDCTICRERLVMSSGYEGVKGIKPEVVGKLGKCGHMYHLLCLVAMY
NNGNKDGSLQCPTCKAIYGEKTGTQPPGKMEYHVIPHCLPGYPEYKTIRIVYDIPAGLQT
TEHPNPGKKFSARGFPRHCYLPDNNKGRRVLKLLIMAWDRRLIFTIGTSSTTGESDTVVW
NEIHHKTEFGSNLTGHGYPDPNYLDNVLTELSAQGVGQDNLKD
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcacggccaggctctggggtgctggtgtcggtcaacgggctggggtacccccctcag
aacctggcccgggtggtggtgtgggagtggctgaatgaacatgggcgctggcggccctac
aacgtgacaacttgccaccacatagagaacgtactgaagggggatacgcgggggactgtg
gtccttggacaggtggatgcccagcttgccccttacgtcatagacctgcagtccatgcac
cagttcagacaggacacaggcaccatgaggccggtccacaggaacttctatgagccgtcg
tcggcccctgggaagggtgtggtgtgggaatgggagaacgacagcggctcctggacgccc
tacgacatggagatctgtgtgaccatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggcttctgctacctcattgacttcaacagcatggtccagaccaac
cggcagagccagaggaaacgccgcctgcgccgacgcatggacctagcctaccctctcatc
atgggctccatccccaagtcccagtcttggcccgtgggagccagctccggccagccctgc
tcctgtcagcagtgcatcctggtcaacagcacgcgggctgcctccaacgccatcctggcc
tctcagcaccgtaagctgtatggtggggctacggggccttcgggggctacaggcacgcac
accttcgctggaaccaccctctggtcccccacatctagtgccgggaccaataatatacaa
cataacaacataagcgcaggaggaggccaagccaaagctgaacaggtgcagtctctcctg
tctagtgccaacttcccatgttccccggcgctgccgtcccttccgcctgcacatggccac
tcccacgcccacgcacactcccacagtcaccatgccatcatcaatgggcagaacaacttg
aaccggccgggcacccagcgcatttccatgggcactgccagaggagccatcccaccaggg
gtccctccccttcctgttaagaaccttactgtctctggaccagttcacccagcaattgca
ggtatgacaggtatcctgatgtgtgcggctggcctgcctgtgtgtctgaccagggcccct
aaacccattctgcacccgccgcccataaacaagagtgacatgaagcctgtgcctggggtc
aacggcatccgccgcaagaccaagaagaagcacctcaggagagggaaaaacccagaggat
gtggtgcggagatacacagagaaagtgaaagtagcccctgatgaggactgcaccatctgc
agggagaggctggtgatgtcatcaggctacgagggtgtcaagggcataaagccagaggtg
gtgggcaaacttggcaagtgtgggcatatgtaccatctgctgtgcctggttgccatgtac
aacaatggcaacaaggatggcagtcttcagtgccccacttgtaaggctatctatggggag
aagacaggcacacagccccctgggaagatggagtaccatgtcatcccccactgcctgccc
ggctacccagagtacaagaccatccgcatcgtctatgacattcctgctgggctacagacc
acagagcatcccaacccagggaagaagttcagcgctagggggttcccccggcactgctac
ctcccagacaataacaaaggcaggagggtcctgaagctcctgatcatggcgtgggaccgc
cgcctcatcttcaccatcggcacgtccagcaccacgggagagtcagacacagtggtgtgg
aatgagatccaccacaagacagagtttggctccaacctgacgggacacggctacccagac
cccaactacctggacaacgttctgacagagctgtcagcccaaggggtgggacaggacaac
ctgaaggactga
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