Salvelinus namaycush (lake trout): 120064529
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Entry
120064529 CDS
T07522
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120064529
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
120064529
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GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
zf-CCCH_2
Omega-toxin
Motif
Other DBs
NCBI-GeneID:
120064529
NCBI-ProteinID:
XP_038871067
UniProt:
A0A8U1H748
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Position
Sna19:complement(5480970..5498630)
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AA seq
886 aa
AA seq
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MGLKDHLEDGTGHNFNLGLDLDYLHVEGTDRQASLSATAGTHSGVLEGEEAQVRGTHSSV
SNSSISSSSSSSNSSEESAASDSEDERGVHHGSGSGAETPHPHPCHPTGLGLPQSPPPRD
PKLPTDPLTEYRSKMEFALKLGYSEELVLLVLRKLGPDALINDILGELVKLGTRTETEEA
GDSTASQSSSSSLSSPSLDSCRLDCSSQLLLDDKENIRPVVVDGSNVAMSHGNKEVFSCH
GIQLAVDWFLQRGHRDITVFVPAWRKEQSRPDALITDQEILRRLEKDKILVFTPSRRVQG
RRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKTEWKKFIDERLLMYSFVNDKFMPPD
DPLGRHGPSLENFLRKRQVIPEHRKQPCPYGKKCTYGHKCKFYHPERGSQPQRSVADELR
ASAKNSSSSSTSSSKSLGSALLVKSHSMSSSSSADGLPEPHQAAPKRRSDPGLCTPSYND
LLEERLGGRTKAEARRGSSSSSSSSCSNNLLVPAPGGPPSSQGFSLQDWRDHNAGRNGSC
KAPGLLGLGHSESYPTCESPKLGYNSLMRAYSSLNLVVPRSPERLFPTDLRTGLLASDCS
SEGSMSSDSFSPDPLLEDGLKCHHPHHDHHHCSSRYPHHTNHPPPGLTLHPHGGSHHSYP
LAQSMGIPQVFSLEDHPSSLHHFKAHLTYLSPHLQHPSVGSSSGCSEDYPPQPPPQTSSP
HCHSHSSTLGHNLGGSTWQDNNSLQNSRLYEHSPVRPRRTYPGMGQEQRLASWDPHYQQL
LQPCYEAFNFQSQPEGHKQPWHSSWPRGTHSPHPQPPSSSHPPPHPSMDPQHQGGRCQDV
RDKVFVNLCNIFPPELVKVVMERNPHVMDAQQLAAAILAEKSQARY
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatggaacaggccacaacttcaatctggggctggat
ttggactacctccatgtggaaggcaccgaccgccaggccagcttgagtgccacagccggc
acccactcaggagttttggagggggaagaggcacaggtgagaggcacccatagcagtgtc
agtaatagcagcatcagcagtagtagtagtagcagtaactcctctgaagaaagtgctgcg
tcggacagcgaagatgagcggggggtccaccatggctctggttctggcgctgagaccccc
catccgcacccctgtcaccctactggactgggcctgccacaaagccccccccctagggac
cccaaactccccaccgaccccctcacagagtatcgctccaagatggaatttgccctgaag
ctgggctactctgaggagctggttttgctggtgctgaggaagctagggcctgacgccctc
atcaacgacatactgggagaactggtcaaactaggcaccaggacagagacggaggaggca
ggggactctaccgcatcccagtcgtcctcctcctccttatcctccccctctctggactcc
tgcagactggactgctcctcccagctgctgttagatgacaaggagaacatcaggcctgtg
gtggtggatgggagtaatgtagccatgagtcatgggaataaggaagtgttctcctgtcac
ggcatccagctggctgttgattggttcctgcagcgtggtcaccgtgacatcactgtgttt
gtgcccgcctggagaaaggaacagtccagaccggacgccctcatcacagaccaggagata
ttgcgacgtctggagaaagacaagatcctggtgttcactccgtctcgtcgggtccagggc
cgccgggtggtctgctatgacgaccgcttcatcgtcaagctggcctacgagtctgacggc
atcatcgtctctaacgacaactaccgggacctggccaatgagaagacagagtggaagaag
ttcattgacgagcggctgctcatgtactcattcgtcaatgacaagttcatgcctcctgat
gatcctctgggtcgccatggccccagtctggagaacttcctgaggaagagacaagtgatc
ccagaacacaggaagcagccctgcccctatgggaagaagtgcacttacggccacaagtgt
aaattctaccaccctgagagaggcagtcagccccagcgctctgtggccgacgagctgcgt
gccagtgccaagaactcctcttcctcctccacctcttcctccaagagcctgggctctgct
ctgctggtgaagagccacagcatgtccagcagctccagtgcagacgggctcccagaaccc
caccaagccgccccaaagaggcggtcggaccccgggctgtgcaccccctcctacaacgac
ctcctggaggagcggctgggcgggaggaccaaagcagaggcccgcagaggtagtagcagc
agcagtagcagcagctgtagcaacaacctcctggtccctgcccctgggggtcctccttcc
agccaaggcttctctctgcaggattggagggaccacaacgcagggaggaacggctcctgc
aaagctccagggctgttggggcttggtcactctgagtcatatcccacctgtgagtcccca
aagctgggctacaactccctaatgagggcgtactccagcctaaacctggtggtgccacgg
agccccgagcggctgttcccaactgacctacggacgggcttgctggcatctgactgcagc
agcgagggcagcatgagctctgactccttctcccctgaccccctgctggaggatggcctc
aaatgccaccacccccatcacgaccaccatcactgctccagccgctacccacaccacacc
aaccacccaccccctggtctgaccctgcacccacatggaggctcccaccatagctacccc
ctagctcagagcatggggataccacaggttttcagcttggaggatcatccctcctccctt
caccacttcaaggcccatcttacctacctttctccccatcttcagcacccatctgtgggg
agcagctctggctgttctgaggactaccctccccaacctccaccccagacctccagcccc
cactgccactctcacagctcaactctggggcataacctggggggctccacctggcaggac
aacaacagcctccagaactcccggctctacgagcactcccctgtccgccccaggaggacc
taccctgggatgggacaggagcagcggctggccagctgggacccccactaccagcagctc
ctccagccctgctacgaggccttcaacttccagtcccagcctgagggccacaaacaaccc
tggcactcttcctggcccagggggacacactcgccccatcctcaacccccttcctcctcc
catcctccaccccacccctccatggacccccagcaccaggggggaagatgccaggacgtg
agggataaggtgtttgtcaacctatgtaacatctttcctccagagctggtgaaggtggtg
atggagaggaacccccacgtgatggacgcccagcagctggctgcagccatcctggctgag
aagtcccaggctcgctactga
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