Salvelinus namaycush (lake trout): 120064553
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Entry
120064553 CDS
T07522
Name
(RefSeq) coiled-coil domain-containing protein 174-like
KO
K25178
coiled-coil domain-containing protein 174
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120064553
03041 Spliceosome [BR:
snh03041
]
120064553
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120064553
Spliceosome [BR:
snh03041
]
Complex C
Other components
EJC/TREX
120064553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
120064553
NCBI-ProteinID:
XP_038871073
UniProt:
A0A8U1F721
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Position
Sna20:28212911..28216690
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AA seq
570 aa
AA seq
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MDKKKKQYAVTASSLVDLKAELYRKQEQFKHEKLGQDAGTSTKAPKIKKPNVWSKQNDGV
SERAQKDVELVAEEENNLDKAKRKLEEKAKLYEQMTKGDFPDEETEGLFLVDFTQKIIDK
KRENHAQRESEREDRESSSTIPPPENPGEEWVDYVDALGRSRRCMKKDLPGFKKMDKDFQ
GKRCDPAEKDLLSEDMRRELQRQEWEREEEEAMNRPVGPIHYENIREQEARELGVGYFAF
SQDQEQRRKQRETLDMLRDQTTDQRSKRDQLKEKRKTLLDARLAKVRQRKMKAAKLDGTG
DDQGDEHNQEGKEDLIGPLPPSGGAPEEAPALKKVVVEIQERRDTKPGVPHVREWDRGKV
DFFGEWTSRRRDERESEFAPPSAYFSNNKRQSYGKEAKREKDKPKMAFKWSEGQGGGRKV
PQANPKSTPVSQPQPRSTPIPQPSTPVPSQPQPTPSPAHSQNTVHLQNTPAPPAPQCPPQ
PPPQYPPSQQPQPLYTPPPPPQTHPQFDNPFQPQFAHLPFHPQYAAPPHYPPQYTPQYPP
QPQTQPQCPPQTQPPSQSLDDMLSFYKNYS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaagaaaaagcaatatgccgtgactgcttcatctttggttgatctgaaagct
gaactctacaggaaacaagagcaattcaaacatgaaaaattggggcaagatgctggaact
agtaccaaagcccccaaaatcaagaaacctaatgtatggagcaaacagaatgatggtgtt
tcagagcgggcacagaaagatgtggaactggtggcagaggaagagaacaaccttgacaag
gcaaagcgcaagctagaggagaaggctaaactgtatgagcagatgaccaaaggagacttt
cctgatgaggagacagagggactttttctggtggatttcacccagaagattattgacaag
aagagagagaatcatgcccaacgagagagtgagagagaggatagagagagctcctccacc
atcccaccccctgagaacccaggcgaggaatgggtggactatgtagatgctttgggacga
tctcggagatgcatgaagaaagacctaccagggttcaagaaaatggacaaagactttcag
ggaaaaagatgtgacccggctgagaaggacctgctgtcagaggacatgcgtagagagctg
caaaggcaggagtgggagagggaggaggaggaggccatgaacagacctgtgggtccaatc
cactatgagaacatcagggagcaagaggcccgtgagctgggtgtgggctactttgcattc
tctcaggaccaggagcagcgcaggaaacagagagagaccctggacatgctcagagaccag
acaacagaccagcgcagtaagagggaccagctgaaggagaagagaaagactctgctggat
gctcggctggccaaggtgaggcagaggaagatgaaggcggccaagctggacggaactggg
gacgaccagggagatgaacacaaccaagaagggaaggaggacctgattgggcccctaccc
ccatcaggtggagcacctgaagaggcccctgcattgaagaaggtggtggtggagatccag
gagaggagggataccaagccaggagtaccccacgtcagagagtgggacaggggcaaagtg
gacttttttggcgagtggacgagtcggcggcgggatgagagggagtcggaatttgcccct
ccctctgcgtacttcagcaataataaaagacagagctatgggaaagaggccaaacgtgag
aaggacaaacccaaaatggccttcaagtggtcagaggggcagggtggagggcgcaaggtg
ccccaggccaaccccaaaagtactcctgtatcccagcctcagcccagaagtactcctata
ccccagccaagtacccctgtaccctcacaacctcaacccacaccatcccctgctcattcc
caaaacactgtccatctccaaaatacacctgcacctccagcccctcagtgccccccccaa
cccccacctcagtaccccccctcccaacagccccaacccttatatacaccacctccacca
ccacaaacacaccctcagtttgataacccatttcagccccaatttgcacatctacccttt
catcctcagtatgcagccccacctcactacccccctcaatacaccccacagtatcccccc
cagccccaaactcagccccagtgcccccctcagacccagcccccctcccagagcctggat
gacatgttgtccttctacaagaattattcttga
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