Salvelinus namaycush (lake trout): 120064627
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Entry
120064627 CDS
T07522
Name
(RefSeq) parapinopsin-like
KO
K04251
long/medium wavelength-sensitive opsin
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
snh04030
]
120064627
G protein-coupled receptors [BR:
snh04030
]
Rhodopsin family
Vision
Opsin
120064627
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Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srsx
7TM_GPCR_Srv
TAS2R
Motif
Other DBs
NCBI-GeneID:
120064627
NCBI-ProteinID:
XP_038871176
UniProt:
A0A8U1F7U7
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Position
20:40966384..40973311
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AA seq
343 aa
AA seq
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MMQLPASLPNASSYLGPSPEGEALLPRAGFITLSIVMAMFTVPAIVLNSTVIVVSLMNKQ
LRQPLNYALVNMAVADLGTALTGGVLSVVNNALGYFSLGRTGCIIEGFSVALFGITSLCT
VALIAIERMFVVSKPLGPISFQTKHAVGGVALSWVWSLIWNTPPLFGWGRYELEGVGTSC
APDWHNRDPNNVSYILCYFLLCFAVPFLIIVASYSKLIYTLRQVSAMGCIEGGAAAKAEA
KVARMVVLMVVTFLISWLPYATLALVVVSHPDAHISPLLGTVPVYLAKSSTVYNPLIYLY
MNKQFRRYAVPFLLCGRDPWPSEEEGSEMQTTVATINNRVSPS
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgatgcagctgccagcctctctccccaacgcttcgtcctacctgggaccgtcccccgag
ggcgaggcgctcctgccccgagccggcttcatcaccctctccatcgtcatggctatgttc
accgtaccggccatcgtgttgaactccacggtgatcgtggtgtcgctgatgaacaagcag
ctgaggcaacctctgaactacgccctggtcaacatggccgtagctgacctggggacagcg
ctgactggtggggttctgtctgtggtcaacaacgctctggggtacttctccctgggacgg
accggctgtatcatagagggattctctgtggctctgtttggtatcacgtcactgtgcacg
gtagctctgattgccatagagaggatgtttgtggtgagcaagccgctaggaccaatctct
ttccagacaaagcatgcggttgggggtgtggccttgtcatgggtttggtctctcatctgg
aacaccccgcccctattcggctggggaaggtacgagctggagggtgtggggacgtcgtgt
gccccggactggcacaaccgggaccccaataatgtgtcatatatcctgtgctacttcctg
ctgtgtttcgccgtgcccttcctcatcatcgtggcctcttactctaaactcatttacacc
ttaagacaggtctctgcaatgggctgtatagaagggggtgcagcagccaaggcggaggct
aaggtggcccgcatggtggttctgatggtggttactttcctgatcagctggctgccctat
gctaccctggccctcgtggtggtctcccaccctgatgcccacatcagccctctgctgggc
accgtgccagtctacctggccaagagcagcaccgtgtacaaccctctcatctacctctat
atgaacaaacagttccggagatatgcagtgcccttcctgctctgtgggagggacccatgg
ccatctgaggaggaggggtcagagatgcagaccactgtggcaaccatcaacaacagagtc
tcccccagttga
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