Salvelinus namaycush (lake trout): 120064684
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Entry
120064684 CDS
T07522
Name
(RefSeq) leucine-rich repeat neuronal protein 1-like
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120064684
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120064684
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Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
ig
V-set
fn3
LRR_EndoS
Ig_2
LRRCT
Pur_ac_phosph_N
LRR_Zer-1
Sp38
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
120064684
NCBI-ProteinID:
XP_038871232
UniProt:
A0A8U1H7A2
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All DBs
Position
20:33879815..33882014
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AA seq
711 aa
AA seq
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MALSPLPWPPLAWLCVGLLFPLLPLVRGGECPRLCVCEVRPWFTPQSTYREAATVDCNDL
RLTCIPSNLSSDTQVLLLQSNSIAHTSGELEALFNLTELDLSQNNFSSVEAVGLANMNQL
TTLHLEENQISQLPDHCLQDLSNLQELYINHNQISTIAPGAFSGLRSLLRLHLNSNRLRV
IDSRWFEATPNLEILMIGDNPVIGILDMNFKPLGSLRSLVLAGMDLTDVPGSALVGLDNL
ESLSFYDNKLVRVPQLALQKVQNLKFLDLNKNPVHKIQEGDFRNMLHLKELGINNMAELV
SIDRYALDNLPELTKLEGTNNPKLSFVHRMAFRDLSSLESLMLNNNALNAIYQRTVEALP
NLREISLHSNPLRCDCVIQWMSSNRTSVRFMEPRAMLCSSPPELRGQRVREVRLQDSPEQ
CLPLISHNTFPSHLSLELGMSVSLDCRAMAEPEPEIYWVSPMGSKITVDTVSERYHLSSE
GTLRLSHVQVEDSGRYTCVAQNTEGADTRVTTIRVNGTLLDSVEVMKIYVKQTESHSILV
SWKINSNVMTSNLKWASATMKIDNPHITYTARVPVDVHEYNLTHLQPGTEYEVCLTVSNI
HLQTHKSCVNVTTRSNTFALDVSGQRPSAALLVVMATMLAFLSLATVGVYVARRWKRKNY
HHSLKKYMQKTSSIPLNELYPPLINLWEVDKEGGAESKPSPVDTTRSYYMW
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggctctaagccccctcccttggcccccactggcatggctgtgtgtagggctgctgttt
cccctgctgccccttgtgcggggcggggagtgcccgcggctgtgcgtgtgtgaggtgcgc
ccctggttcaccccccagtccacctacagggaggcggccacggtggactgcaacgacctg
cggctgacatgcatcccctccaacctgtcttctgacacccaggtgctgctgctccagagc
aactccatcgcccacaccagcggggagctagaggccctgttcaacctgacggagctggac
ctatcccagaataacttcagcagtgtggaagccgtgggcctggccaacatgaaccagctc
accaccctgcacctggaggagaaccagatcagccaactgcccgaccactgcctgcaggac
ctgagcaacctgcaagagctctacatcaaccacaaccagatcagcaccattgccccaggg
gccttctctggcctgcgtagcctgctgcgcctccacctcaactccaacaggctccgggtc
atcgacagccgctggttcgaggccacgcccaacctggagatcctgatgatcggcgataac
cccgtcattggcatcctggacatgaacttcaagcccctggggagtctgaggagcctggtt
ctggccggcatggatctcaccgacgttcccgggagtgctctggtgggtctggataacctg
gaaagcctgtccttctacgacaacaagctggtccgagttccccagctggccctgcagaaa
gtgcagaacctgaagttcctggacctgaacaagaacccggtgcacaagatccaggagggg
gacttcaggaacatgctgcatctgaaggagcttggcatcaacaacatggctgagctggtg
tccatcgaccgttacgcactggacaacctgcctgagctgaccaagctggagggcaccaac
aaccccaagctgtcctttgtccaccggatggctttcagggacctgtcctccttggagagc
ctgatgctcaacaacaacgccctcaatgccatctaccagcgcaccgtggaggcgctgccc
aacctgcgcgagatcagcctgcacagcaacccgctgcgctgtgactgtgtcatccagtgg
atgagctcaaacaggaccagcgtgcgattcatggagccccgggctatgctgtgtagctca
ccgcccgagctccggggccagcgggtcagggaggtgaggctacaggactccccagagcag
tgcctgcccctcatctcccacaacaccttccccagccacctgagcctagagctgggcatg
agtgtcagcttggactgccgggccatggccgagcccgagccagaaatctactgggtgtct
cctatggggagcaagatcacggtggacacggtgtcggagcggtaccatctgagcagtgag
ggcaccctgcggctgtcccacgtccaggtggaggactcaggccgctacacctgcgtggct
cagaacacagagggggccgacacacgcgtcaccaccatccgggtcaacggcaccctgctg
gacagcgtcgaggtgatgaagatctacgtcaagcagaccgagtcccactccattctggtc
tcctggaagatcaactccaacgtcatgacctccaaccttaagtgggcctcggccaccatg
aagattgacaatccccacatcacctacactgcacgcgtgcccgtcgatgtgcacgagtac
aacctgactcacctgcagccgggcactgagtatgaggtgtgcctcaccgtctccaacatc
cacctgcagacccataaatcgtgcgtcaacgtgaccacgcgcagcaacaccttcgccctg
gacgtgtcgggccagaggcctagcgccgccctgctagtcgtcatggccaccatgcttgcc
ttcctcagcctggccaccgtgggggtgtacgtggcccggcgctggaagaggaagaactat
caccactccctgaagaagtacatgcagaagacctcctccatccccctcaatgagctctac
ccgcccctcatcaacctgtgggaggtggacaaggagggcggggcagagagcaagccctcc
cccgtggacaccacacgcagctactacatgtggtga
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