Salvelinus namaycush (lake trout): 120064773
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Entry
120064773 CDS
T07522
Symbol
si:dkey-28n18.9
Name
(RefSeq) sorting nexin-6
KO
K17920
sorting nexin-5/6/32
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120064773 (si:dkey-28n18.9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120064773 (si:dkey-28n18.9)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120064773 (si:dkey-28n18.9)
Membrane trafficking [BR:
snh04131
]
Endocytosis
Macropinocytosis
Sorting nexins
120064773 (si:dkey-28n18.9)
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
120064773 (si:dkey-28n18.9)
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Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
Tup_N
Flavodoxin_1
Motif
Other DBs
NCBI-GeneID:
120064773
NCBI-ProteinID:
XP_038871305
UniProt:
A0A8U1H7G4
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Position
Sna20:33747007..33768059
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AA seq
438 aa
AA seq
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MDEDLFLEDVGDSWSFQLGGEDEDDLHEYQAFLGSSFFDLSGDPFSQMGLGDHEGKQFCW
KKTHTDSSAEEEEAREGSLSVSAQTIRVTEAVRDGDALTFIVISQKLSGSGEYHVARTHE
DFQWLQQCLFSQEVVPGILGVIFPPLPAKPQLNAPTKVLKQLGFLAMGEDWRMYCMALET
YLQQVAAHTTLSKNKCLENFLTSSEPPGRQRVRKGIFNRLSQAMEGMRKEGHKDVDDFFQ
TERDNNLTLTGCSKSATERFIDVVLTEQKLAVACGHFSTALHLCVEQEEDSAVLAFSKIC
VKLSEVIDSIKRNFESVAENNLSTLGLGLDLESRCQEAEKEMLYRRTCKLVVLETASRNA
ERAKPVKTAAMDELKVAAEKEFDHVSGVAKQEIARFHSTRVELLRQALILWCEKQLETAR
DTSFRYSEHLQAFKGLGE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggacctctttctggaggatgtgggggactcctggagcttccagttgggggga
gaggatgaggatgacctccatgagtatcaggccttcctgggtagcagcttctttgacctc
tcgggggatcccttcagccagatggggctgggggaccatgagggaaagcagttctgctgg
aagaaaacgcatacagacagcagtgctgaggaagaggaggctagagaggggtcacttagt
gtgagtgcccaaactatccgggtcactgaggccgtgagagacggggatgcactgaccttc
atagtcatatcccagaagttgtcaggcagtggggaataccatgtggctaggactcatgag
gactttcagtggttgcagcagtgtctgttctctcaggaggtggtgcctgggatactgggt
gtcatttttcctcctctaccagccaaacctcagttgaatgcaccaaccaaagttctgaaa
caacttggtttcttggccatgggggaggactggcgtatgtactgcatggcactggagacc
tatctccagcaggtggcagcacacaccacgctcagcaagaacaaatgcctggagaacttc
ctcactagctcagagcccccaggtcgtcagagggtgaggaagggtatcttcaatcgcctg
agccaggccatggaagggatgaggaaggagggccacaaggatgtggatgacttttttcag
actgagcgtgataacaacttaaccctcactgggtgctccaaatcagcaacagagaggttc
attgatgtggtgctgacagaacaaaaactagcagtggcttgtggacacttctcaaccgct
ctgcatctctgtgtggagcaggaagaagactcggctgtcctggccttctcaaagatatgt
gtcaagctgtctgaggtcatagattcaatcaagagaaactttgagagtgttgctgagaac
aacttgagcactctggggctggggctggatctggagtctcgttgccaagaggcagaaaag
gagatgctgtacaggaggacctgtaagcttgtggtgctagaaacagccagcaggaatgca
gagagagccaagcctgtaaagacagctgctatggatgaattgaaggtggcagctgagaag
gagtttgatcatgtatctggagtggctaaacaggagatagcaaggttccacagtactcgt
gtggagttgttacgccaggctttgattctgtggtgtgagaagcagcttgaaacagccagg
gacacctccttccgctacagcgagcacttgcaggccttcaaagggctgggggagtga
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