Salvelinus namaycush (lake trout): 120064821
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Entry
120064821 CDS
T07522
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-3-like
KO
K04860
voltage-dependent calcium channel alpha-2/delta-3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04260
Cardiac muscle contraction
snh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120064821
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120064821
04261 Adrenergic signaling in cardiomyocytes
120064821
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120064821
Ion channels [BR:
snh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
120064821
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Gene cluster
GFIT
Motif
Pfam:
VWA_N
VGCC_alpha2
dCache_1
VWA
VWA_3
VWA_2
MCP-like_PDC_1
SepSecS
dCache_2
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
120064821
NCBI-ProteinID:
XP_038871347
UniProt:
A0A8U1F7I1
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Position
Sna20:complement(40842654..40938039)
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AA seq
1086 aa
AA seq
DB search
MLWNWKILVSHVCCASFLLFWIILGTAVVDVIGSQQGIPLSVVKLWASAFGGEIKSISAK
YSGSQLLQKKYKELEKSVRVEEIDGMKVVKNLSKKMEDMFRKKKEAIRRLVEAAEEAHLQ
HEENPELQYEYFNAVLINEVDEEGNNVELGGEFVLEPNEHFNNLSVNLSLSVVQVPTNMY
NKDPAIVNGVYWSEALNKVFVDNFEKDPSLIWQYFGSAKGFFRQYPGVKWHPDEHGVIAF
DCRNRKWYIQAATSPKDVVILVDVSGSMKGLRLTIARQTVSSILDTLGDDDFFNIIAYNQ
EIHYVEPCLNGTLVRADRNNKAHFREHLDKLFAKGIGLLGDALTEAFTILNDFNQTGHGS
VCSQAIMLVTDGATQMYDDVFAKFNWPDRKVRIFPYLIGRESAFADNMKWMACANKGYFS
QISTLADVQENVMRYLHVMSRPKVIDHEHDTVWTEAYMDSTGSIISRNKKGPSLMTTVAM
PVFSTKNETKNQGILLGVVGTDIPLQELMKIIPKHLLGIHGYAFAITNNGYILTHPDLRP
LYQKGQKRRKPNYSSVDLSEVEWEDKDDFLRNAMVNRKTGTFSMEVKKTVDKGKRLLKMH
NDYYYTEVKGTPFSVGVALSRGHGKFFFRGNVSVEAGLHDLEQPDVALADEWTYCNTDEH
YEHRSLSQIQAIKLYLTGRKPLIKCDRELIQEVLFDAVVTAPLEAYWTGLALNKSENSDK
GVEIAYLGTRTGLSRTNLFVVQEDLSNQDFLTAEDKEGVFNADHFPLWYKRAAEQVPGTF
VYSIPFGGNENKSVVLASTAIQLLDDRKSPIVASVGIQMNLDFFQRKFWTASRQCAALDG
KCSISCDNEDIKCYLIDNNGFILVTEDYSQTGEFFGEVEAAVMTKLLLIGSFKRINLYDY
QALCREYAGSSDSGHCLSHPFSIVKWLLTELVIFLLEFNLYSWWHVDLSVKAQNSRGKTM
LVPCDTEYPAFVSERTIKETTGNIDCEGCVRSFVIQQIPSSNLFMVVVDNKCDCSSTLPV
SMDPIEIMYNESLKCDRLKFQKDRKRPESCHPFHPEENAMECGGAAGLSAPLTAALLPLL
ATLFTR
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgctgtggaattggaagatcctcgtttcgcacgtgtgctgcgccagcttccttctgttc
tggattatactgggcacggcagtggtggacgtgatagggtcccagcaagggattcctctc
tcagtggtgaagttatgggcctcagcgtttggtggagaaattaaatcaatttctgcaaaa
tactctggatcccagctgctgcagaagaaatataaagaattggaaaagtctgtccgagtg
gaagaaattgatggcatgaaagtggtcaaaaatctatcgaagaagatggaggacatgttc
cggaagaaaaaggaggcaattcggaggctggtggaggcagcagaagaggcacatctacag
cacgaggaaaacccagagctgcagtatgagtacttcaacgcggtgctgatcaacgaggtg
gatgaggagggcaacaacgtggagctgggaggagagtttgtcctcgaacccaatgaacac
ttcaacaacctgtcagtcaacctcagcctcagtgtggtgcaggtgcccaccaacatgtat
aacaaagatcctgccatagtgaatggggtgtattggtcagaggccttgaataaagtgttt
gtggataactttgaaaaagatccgtccctgatatggcagtactttggcagtgccaagggc
ttctttaggcagtatcccggggtcaaatggcatccagacgaacacggggtcatcgccttt
gactgcaggaacaggaaatggtacatccaggcagcgacatctcctaaagacgtggtgatt
ctagtagacgtgagtggcagtatgaagggcctgagactgaccatcgccagacagactgtc
tcctctatactggacacactgggagatgacgacttcttcaacatcatcgcttacaatcaa
gagattcactatgtggagccttgtctgaatggtacactggtacgagcagacagaaacaat
aaagctcattttagagaacatctggacaagctgtttgccaaagggattggtctgctgggt
gatgctcttaccgaagcattcaccattctaaatgattttaaccagactgggcatggcagt
gtgtgtagccaggccatcatgcttgtgactgacggggccacacagatgtacgacgatgtt
ttcgccaagttcaactggccagacagaaaggtgcgcatattcccttacctgattggccga
gagtctgcctttgctgataacatgaaatggatggcctgtgctaataaagggtatttcagt
cagatctccacactggctgatgtacaggaaaatgtgatgaggtatcttcatgttatgagt
cgtcctaaagtcatcgatcatgaacatgacacggtctggacagaggcctacatggacagc
actgggagtatcatatccagaaacaagaagggccccagcctgatgaccactgtggccatg
cctgtgttcagcaccaagaacgaaacgaagaaccagggtattctcctaggggtagtgggc
acagacattcccctacaggaactcatgaagatcatccctaaacacctgctgggtatccac
ggttacgcgtttgccatcactaacaacggctacatcctgacccatccagacctgaggcca
ctgtaccagaagggccagaagaggaggaaacccaactatagcagtgtggacctgtctgag
gtggagtgggaggacaaggatgactttctgcgtaatgccatggtcaacaggaagactggg
actttctccatggaagtgaagaagacagtggacaaagggaaacgtctcctgaagatgcac
aatgactactactacactgaagtcaagggaactcccttcagtgtcggtgtggctttgtcc
agaggccatggcaaattcttcttcagaggaaacgtctccgtagaagcagggcttcatgac
ctggaacagccagatgttgcgctggcagacgaatggacgtactgcaacacagacgagcac
tatgagcaccgttctctctcccagatccaggctattaaactctacctgaccggacgcaaa
ccactcatcaaatgtgacagggagctgatccaggaggttctgtttgatgctgtggtcaca
gccccactggaggcctattggacaggcctggccctcaacaagtcagaaaattcagataaa
ggtgtggagattgcttacctgggcacacgcactggcctctctagaaccaacctgtttgtt
gtccaagaggatctatccaatcaagacttcctgacagcggaggataaggagggggtgttt
aacgctgaccacttccccctgtggtataaaagagcagcagagcaggtccctggcacattt
gtctactccatcccctttggaggaaatgagaataagagtgtggttttggccagcaccgcc
atacagctgctggatgacaggaagtcacccattgttgcatccgttgggattcaaatgaac
ttggatttctttcagaggaagttctggaccgctagcagacagtgtgctgctctggatggg
aagtgcagcatcagctgtgataatgaggacatcaagtgttacctcatagacaacaacggc
ttcattctggtcacagaagactactctcagacgggggagttctttggcgaggtggaggct
gctgttatgaccaagctgctcctcattggctccttcaagaggatcaatctgtatgactac
caggctctctgtagagagtatgctggcagcagtgacagtggacactgtttatcacatccc
ttctccattgtgaaatggctcctgactgaactagtaattttcctcctggaattcaacctg
tacagctggtggcatgttgacctctctgtcaaagcccaaaactcgaggggaaagaccatg
ttggtgccatgtgatactgagtaccctgcctttgtctctgagcgtaccatcaaagagacc
acgggcaacattgactgtgagggctgtgtcagatcttttgttattcagcagattcccagc
agtaacctcttcatggttgtcgtggacaacaagtgtgactgtagctccacccttccagtt
tccatggaccccattgagattatgtacaacgaatctctgaaatgtgataggctgaagttt
cagaaggacaggaagcgaccagaatcatgtcatcctttccaccctgaggagaatgccatg
gagtgtggaggagcagcaggcctgtctgcccccctcacagcagcactgctccccctgctg
gccactctcttcaccagatga
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