Salvelinus namaycush (lake trout): 120064909
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Entry
120064909 CDS
T07522
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04517
IgSF CAM signaling
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120064909
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120064909
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120064909
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120064909
Intermediate filaments
Intermediate filament-binding proteins
120064909
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
120064909
NCBI-ProteinID:
XP_038871428
UniProt:
A0A8U1H5P6
LinkDB
All DBs
Position
2:57813429..57884870
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTVAADYEHMEITQQYSSSDTVNNRWDDEWDNENSSARLFERSRIKALADEREAVQKKT
FTKWVNSHLSRVSCRITDLYRDLSDGRMLIKLLEVLSGERLPKPTRGRMRIHCLENVDKA
LQFLKEQRVHLENMGSHDIVDGNHRLTLGLIWTIILRFQIQDISVETDGDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLNGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKTWERLEKAEHERELALRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVDAATKKHEAIETDITAYEERV
QAVVSVAKELEAEKYHDIKRIAARKDNVIRLWEYLLELLKARRQRLEMNLGLQRVFQEML
YIMDWMDEMKMMLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNNNAQKFAIDG
DVYKPCDPQVIRDRMAHMEFCYQELTQLAAERRARLEESRRLWKFFWEMAEEEGWIREKE
QILSSDESGKDLTGAVRLLSQHRTLEDEMNGRASHLQHTIAEGQAMADGGHFGAAKIRDR
IADLRAQWAALEELAAIRKAHLEEACALHQFQADADDADAWTLDALRIVSSGEVGHDEFS
TQALVRKHKAAAAEVASYRPVIDALHEQAAALPEEQAQSEEVKGRLAGIEERYKEVAELT
RLRKQALQDALALYKMFSEADACEVWIDEKDQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKDIKAQQDKLNNRWSQFRDLTDQKKESLVSALGVQ
NYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGE
AERLAGEHPDQANAITGRLAEITAVWEEMKATLCNREESLGEASKLQQFLRELDDFQSWL
SRTQTAIASEETPNTLAEAEKLLAQHDGIKNEICNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTKQAEVSLNNQEYMLAHTEMP
TTFEGAEGAIKKQEDFMTTMDANEEKINGVVEAGRRLASDGNINADRIQERATSIDDRHK
KNREAAVELLMRLKDNRDLQKFLQDCQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIEKDGMQLVLEKPETESVVKEKLSALQKMWEELESTTQTKAQCLFD
ANKAELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQILENQVEVRQREVVE
LQSQALVLSQEGKDTGEVDGQRQMVEHKFQELLDPLRKRKNFLVASREIHQFNRDVEDEI
LWVEERMPIATSTDHGHNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFERSESLLMEDSLA
VEAIRQRLADLQQLWGLMIEETEKRHARLEEAHNAQKYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSSVAMLKKHQIVEQSVEDYAETVHQLSKTSRGLTAAGHPESERIGMRQSQVDKL
YAGMKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFARDTGNIGQERVDAVNRLADELINAGHTDAATVAEWKDGLNEAWADLLELIDTRTQ
ILAASYELHKFYHDAKEILGRILDKHKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWNTLLEACDGRRVHLLDTGDKFRFFSM
VRDLMLWMEDVIRLIEAQENPKDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLA
RKHYASEEIKDKLLQLMDKRKDMIDKWEDRREWLRLILEVHQFGRDAGVAEAWLLGQEPY
LFGRELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRK
PPSPEPLPEQDSPLQSGVENGLQNGLPSDQDSPQNGVDRVEIMNGVAEQNSKDPSPIPSP
TASRRGKGSLSSTLPTQNQDLPAAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNQEM
GFYKDNKAAGQGIPYHNAIPISLMGAVCDVAMDYKKKKHVFKLRVTDGNEYLFQAKEEEE
MSTWIQAILNAGTPDKVSITPSNQSTPASSRAQTLPATVTLTSESSPGKREKDKEKDKEK
RFSLFGKKKL
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcggattatgagcacatggagatcacgcagcagtacagcagcagc
gacacggtcaacaaccgctgggatgatgagtgggacaacgagaacagctcagctcgcctg
ttcgagcgctcgcgcatcaaggccctggcagatgagcgcgaagcggtgcagaagaagacc
ttcaccaaatgggtgaactctcacctctcccgggtgtcctgccgcatcaccgacctgtac
agggacctgagtgatggacgcatgctcatcaaactgctggaggtgctgtctggggagaga
ctgcccaagcccaccaggggacggatgcgtatccactgcctggagaatgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggaaaacatgggctcacatgacatcgtt
gacggcaaccaccgcctcaccctgggcctcatctggaccatcattctcaggttccagatc
caggacatcagtgttgagactgatggagacaacaaggagaagagatcagccaaggacgcc
ctgctcctctggtgccagatgaagactgctggctatccaaacgtgaacattcacaatttc
agcaccagttggcgagacggcatggctttcaatgccctcatccataagcacaggccagac
ctgattgactttgacaagctgaaaaagtccaatgcccaccacaacctgcagaatgccttc
aatctggctgagcagcatcttgggcttaccaagctcctagacccagaggatatcagtgtg
gaccaccccgatgagaagtccgtcatcacatacgtggtgacgtactaccactacttctcc
aaaatgaaggcactgaaagtggaggggaaacgtattgggaaggtactggacaatgccatt
gagacagagaagatgattgagaagtacgagtctctggcctcagatctgctggagtggatc
gagcagaccatcatcatcctcaacaatcgcaagtttgccaactctttaaacggggtgcag
cagcagcttcaagccttcaacacatatcgcacggtcgagaaaccccctaagtttactgag
aagggcaacctggaggtgcttctctttaccatccagagcaagatgagggccaacaatcag
aaagtctacatgcccagggagggcaaactcatctctgacattaacaagacctgggagaga
ctggagaaggcggagcatgagcgggagctggctctgaggacagagctgattcgacaggag
aaactggagcagctggctcgccgctttgaccgcaaggctgccatgagggagacctggctg
agtgagaaccagcgcctcgtctcacaggacaactttggcttcgaccttccggcggtggac
gcggccacgaagaagcatgaggccatcgagacggatattacggcgtacgaggagcgtgtg
caggccgtggtgtctgtcgctaaggagctggaggcagagaagtaccacgacatcaaacgc
atcgcagcgcgcaaggacaacgtgatccggctgtgggagtacctgctggagcttctgaag
gcgaggcgccagcgcctggagatgaacctgggtctgcagagggtcttccaggagatgctt
tacatcatggactggatggacgagatgaagatgatgctgctgtcccaggactatgggaag
catctgctcggagtggaggatctcctgcagaaacatgccctggtagaggccgacatcggc
atccaggctgaccgtgtcaaagctgtcaacaacaatgctcagaaattcgccatcgacggc
gacgtttacaagccctgtgaccctcaggtaatacgcgaccgcatggcccacatggagttc
tgctaccaggagctgacccagctggctgccgagcgccgggcccgcctggaggagtcccgc
cgtctctggaagttcttctgggagatggccgaggaggagggctggatccgtgagaaggag
cagatcctgtcgtcagacgagagcggcaaggacctgacgggcgcagtgcgcctgctaagc
cagcaccgcaccctggaggacgagatgaacggccgtgccagtcacctgcagcacaccatc
gccgagggccaggcaatggccgacggtggccacttcggcgccgccaagatccgcgaccgc
atcgccgacctgcgggcgcagtgggcagcgttggaggagctagcggccataaggaaggcc
catctggaggaagcgtgtgccctgcaccagttccaggcggacgcagacgatgccgatgcc
tggaccctggacgccctgcgcatcgtgtccagcggcgaggtgggccatgacgagttctcc
acacaggccctggtgcgcaagcacaaggccgccgccgccgaggtggccagctatcggccg
gtgatcgatgcgctccatgagcaggcggccgccttgcctgaggagcaggctcagtcggaa
gaggtcaagggccgcctggcaggcatagaggagcgctacaaggaggtggccgagctgacc
cggctgagaaagcaggcgctgcaggacgccctggccctctacaagatgttcagcgaggcg
gacgcctgcgaggtgtggatcgatgagaaggatcagtggctcaacagcatggagatccca
gagaagctagaagacctagaggtcattcagcacaggttcgagagcctggagcctgagatg
aacaaccaggcgtcacgcgtcgctgtcgtgaaccagatcgccaggcagctgatgcataac
ggacaccccagtgagaaggacatcaaagcccagcaagataagctcaataacagatggagc
cagttccgggatctgacagaccagaagaaggagtctctagtctcggcgctgggtgtgcag
aactaccacctggactgcaacgaaaccaagtcgtggatccgcgagaagacaaaggtcatc
gagtctacccaggagctgggcaacgacctgacgggtgtcatggcgctgcagcgtaaactc
actggcatggagcgtgacctggctgccatcgaggacaagctgggcgacctgcgtggcgag
gccgagcggctggccggcgagcacccggaccaggccaatgccatcacgggccgcttggct
gagatcaccgccgtgtgggaggagatgaaggccacactgtgtaaccgcgaagagtccctt
ggcgaggccagcaagctgcagcagttcctgcgcgaactggatgacttccagtcgtggctg
tcgcgcacacagacagccatcgcctcggaggagacgcccaacacgctggctgaggcagag
aagctgctagcacagcacgacggcatcaaaaacgagatctgcaactacgaggaggactac
cagaagatgcgagacatgggcgagatggtgacccagggccagaccgatgcccagtacatg
ttcctgaggcagcggctacaggcactggacacaggctggaacgagctgcacaagatgtgg
gagaaccggcagaacctgctgtcacagtcccacgcctaccagctgtttctcagggacacc
aaacaggccgaggtctccctcaacaaccaggagtacatgctggcccatacagagatgccc
actacgtttgagggggccgaaggagccatcaagaagcaggaggacttcatgaccaccatg
gacgccaacgaagagaagataaacggcgtggtggaggctggcaggcggctggcgagcgac
ggcaacatcaacgccgaccgcatccaggagagagcgacgtctattgacgacaggcataag
aagaaccgcgaggctgctgtggagctactgatgaggctgaaggataaccgggaccttcag
aagttcctacaggattgccaggagctgtctctgtggatcaacgagaagatgctcacggcc
caggacatgtcgtacgacgaggccaggaacctccacagcaaatggctcaagcatcaggcc
ttcatggccgagttgcagtccaacaaggagtggctggacaagattgagaaggatgggatg
cagctggtgttggagaagcctgagacagagtcggtggtcaaggagaagctctcagccctc
cagaagatgtgggaagagttggagtccaccacccagaccaaggcccagtgcctgtttgac
gccaacaaggccgagctgtttacacagagctgtgccgacctggacaagtggctgggtggc
ctggagggccagattcaatcggacgattacggcaaagacctgaccagcgtcaacatcctg
ctcaagaagcagcagatattggaaaaccaggtggaggtccgtcagagggaggtggtggag
ctgcagagccaggcgctggtcctcagccaggaagggaaggacacgggggaggtggatggc
cagagacaaatggtggagcacaagttccaagagctgctggacccgctgaggaagagaaag
aacttcctggtggcctcccgcgagatccaccagttcaaccgcgatgtggaggacgagatt
ctttgggtcgaagagaggatgccaattgcaacctccacggatcatggtcacaacctgcag
accgttcaactgcttatcaagaaaaatcagaccttgcagaaggagatccagggacaccag
ccccgcttcgatgacattttcgagcggagcgagagcctgctgatggaggacagccttgcc
gtggaggccatccgccagcgcctggccgacttgcaacagctgtggggcctgatgattgag
gagacggagaagcgtcacgcccgtctggaggaggcccacaatgcacagaagtactacttt
gatgccgctgaggctgaggcctggatgagcgagcaggagttgtacatgatgtctgaggag
aaggccaaggatgagcagagctccgtagccatgctgaagaagcaccagattgtggagcag
tcggtggaggactacgctgagacagtccatcagctctccaagaccagcagaggcctgaca
gctgcaggacatccagagagtgagaggataggcatgcgtcagtctcaggtggacaagctc
tatgccggcatgaaggacctgtctgaggagaggcggggcaaactggacgagcggttccgc
ctgttccagctcaaccgcgaggttgacgacttggagcagtggattgccgagcgggaggtg
gtggccggatctcatgagctgggacaggactacgagcatgtcaccatgctccaggagcgc
ttccgagagtttgcgcgcgacacaggcaacatcggccaggagcgtgtggatgccgtcaac
cgcctggccgatgagctgattaatgcgggccacacagatgccgccacggtggccgagtgg
aaggacggactcaacgaggcctgggctgacctgctggaacttatcgacacgcgcacacag
atcctggccgcctcctacgagctgcacaagttctaccatgacgccaaggagatcctgggc
cgcatcctggacaaacacaagaagcttccagaggaggtgggacgtgatcagaacacagtg
gagacactgcagaggatgcacaccaccttcgagcatgacatccaggccctgggaacacag
gtgaggcagctgcaggaggatgccgtccgcctccagtcggcctacgccggcgacaaggca
gacgacatccagcggagggagagcgaggtgctggaggcctggaataccctgctggaggcc
tgcgatggccgcagggtccacctcctggacacgggcgacaaattccgcttcttcagcatg
gtgcgcgacctcatgctgtggatggaggacgtcatccgtctcatcgaagcccaggagaat
ccaaaggacgtgtcctcggtggagttgttgatgaacaaccaccagggtatcaaggctgag
atcgacgcccgcaatgacagcttcaccgcctgcattgagttgggcaagtctctgctagcc
agaaagcactatgcatcagaggagatcaaagataaattactacagctgatggacaagagg
aaagacatgattgacaagtgggaggaccgaagggagtggttaagactgattttggaagtt
caccagtttgggagggatgcaggggtggcagaggcgtggctgctgggacaggaaccatac
ctgttcggccgggagttggggcagagcgtggacgaggtggagaaactgatcaagaggcac
gaggcattcgagaagtcggccgccacttgggaggagcgcttctcagcactggagaggttg
actacgttggagttattggaagtgagaagacagcaagaggaagaagaaagaatgcgaaaa
cccccttcgccagagcctttaccggagcaggactcaccactgcagagtggagtcgagaac
ggactgcagaacggactgccctcagaccaggattccccacagaatggcgtggacagagtt
gagatcatgaatggagtggcggagcagaactcaaaggacccgagccccattccctcaccc
acagccagccggcggggcaagggcagcctgtcctccacattgccgacccagaaccaggat
ttgcctgcggctcagctggagggcttcctgcatcgcaagcatgagtgggagggtcacaac
aagaaggcctcaagcagatcctggcataacgtgtactgcgttatcaacaatcaggaaatg
ggcttctacaaagacaacaaggctgctggtcaaggcatcccctaccacaatgcgattccg
atcagtctaatgggggctgtgtgtgatgtggccatggattacaaaaaaaagaagcatgtc
ttcaaactcagagttacggatggaaatgaatatctcttccaagccaaagaagaagaggag
atgagcacatggatccaggccattctgaatgcggggacacctgacaaggtatcgattacg
cccagcaaccagagcactccggcgtcgagccgagcccagaccctgcccgccactgtcacc
ctcaccagcgaatccagcccgggcaagcgggagaaagacaaggagaaggacaaggagaag
cgattcagcctcttcggcaagaaaaaactataa
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integrated database retrieval system
