Salvelinus namaycush (lake trout): 120064969
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Entry
120064969 CDS
T07522
Symbol
sdc4
Name
(RefSeq) syndecan-4 isoform X1
KO
K16338
syndecan 4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04512
ECM-receptor interaction
snh04514
Cell adhesion molecule (CAM) interaction
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120064969 (sdc4)
04514 Cell adhesion molecule (CAM) interaction
120064969 (sdc4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120064969 (sdc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
snh00535
]
120064969 (sdc4)
Proteoglycans [BR:
snh00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
120064969 (sdc4)
SSDB
Ortholog
Paralog
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Motif
Pfam:
Syndecan
Dsc3_C
Motif
Other DBs
NCBI-GeneID:
120064969
NCBI-ProteinID:
XP_038871512
UniProt:
A0A8U1F7T7
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Position
20:complement(3513793..3524667)
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AA seq
208 aa
AA seq
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MHKVFLVLFLFGSVYSESVRETETWMPMKMTQAVSHDELVASGDAPNGSDFGFPDEERDT
FDNEDETDDEDFSGSGDEVTTITLKNDKTMTKPDMNDNKIPDLDRPLMSKPTPNEIEQVQ
KNNEVSVRGAPKPEEYPSNVLMAHAGEESVFRKTEVLAALIAGGAVGLLFAVFLVLLLVY
RMKKKDEGSYDLGKKPIYKKAPTTEIYA
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcacaaagtcttcctcgtgttgtttttatttggctccgtctactctgagtcggtgcgg
gagactgagacatggatgcccatgaagatgacccaagccgtgtcgcatgacgagcttgtt
gcgtctggtgacgcccccaacggctccgactttggcttccccgatgaggagcgcgacaca
tttgacaatgaggatgaaacggatgatgaagacttctctggctctggagatgaagtaact
actattacactcaagaatgacaaaaccatgacaaagcctgacatgaacgacaacaagatc
ccagacctggacagacccctgatgtccaaacccacaccaaatgagattgaacaggtccag
aagaacaatgaagtgtccgtgcggggtgctcccaaacccgaggagtacccatcaaacgta
ctgatggcccatgcaggggaggagagcgtcttcagaaaaacagaggtcttagcagctctg
attgctggtggagcagtggggctgctctttgccgtcttcctcgtccttctgctcgtctat
cgcatgaagaagaaggacgaaggcagctacgacctgggaaagaagcccatttataaaaag
gctccgacaacggagatctatgcctga
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