KEGG   Salvelinus namaycush (lake trout): 120065063
Entry
120065063         CDS       T07522                                 
Name
(RefSeq) host cell factor 1-like
  KO
K14966  host cell factor 1
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03083  Polycomb repressive complex
snh04980  Cobalamin transport and metabolism
snh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    120065063
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    120065063
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    120065063
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:snh01009]
    120065063
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:snh03036]
    120065063
   03029 Mitochondrial biogenesis [BR:snh03029]
    120065063
Protein phosphatases and associated proteins [BR:snh01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     120065063
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    NSL complex
     120065063
   HMT complexes
    COMPASS/SET1 complex
     120065063
    MLL-HCF complex
     120065063
   Polycomb repressive complex (PRC) and associated proteins
    PR-DUB complex
     120065063
Mitochondrial biogenesis [BR:snh03029]
 Mitochondrial quality control factors
  Regulator of mitochondrial biogenesis
   Other regulator of mitochondrial biogenesis
    120065063
SSDB
Motif
Pfam: Kelch_3 Kelch_5 Kelch_4 Kelch_1 Kelch_6 fn3
Other DBs
NCBI-GeneID: 120065063
NCBI-ProteinID: XP_038871673
UniProt: A0A8U1F860
LinkDB
Position
Sna20:14981804..14995298
AA seq 1615 aa
MTGSMVSGTTGSTLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHV
YNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWK
KLKAKTPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRAG
SSVVGWDIPITYGVLPPPRESHTAVVYTEKDSKKSRLIIYGGMSGCRLGDLWTLDIDTLT
WTKPSVNGTAPLPRSLHSATTITNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNL
DSMAWESVVMDTLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLET
ERPHAPSRVQLVRANTNSLEVSWGAVSTADTYLLQLQKYDIPAATAVTSQALNAATSLQG
NLPKSPATAAPSAQNLPHTAILKVAAPPSGTGTSLVTVRPNQAGKSPVTVTSLLPGVRMV
VPAQTAQGTPVGSSPQMSGMAALAAAAAATQKIPPSSSTVLNIPAGATLVKTMAVSPGST
TVKMASPLMVSNPATRMLKTAAAQLGIATVSSPNSPNRPIITVHKSGTVTVAQQHQVVTT
MVGGVTKTITLVKSPLTMGGSGTLQISNLGKMMSVVQTKPVQTSAVTGQASTNPLTQLIQ
TKGSLPAGTILKLVTSADGKPTTIITTSQAGGTGNKPTILNISGMSPTTTKQGTTIIKTI
PMSAIMTQPGATVTSSTGKTPYTIITTKMMTTGTPGKIITTMPKLGTATGQQGLTQVVLK
GAPGQPGTILRTVPMGGVRLVTPVTMSSVKPNITTLVVKGTTGVTTLGTVTGTVSSSLAG
SIVASANASLATPITTLGTIATLSSQVINPTAITVSAAQTSLTTATTLSTSTMSANQPTQ
VTLITTPSGVEAQPVQDLPVSFLASPTSEQPSSTEVGDAPGTVTMVCSNPPCETHETGTT
NTATTASSDIGGVQRVCSNPPCETHETGTTNTATTASTDMGGAMRTSNSSSSGTATGNQG
PENLSTGTTFTPTTACSNMGSAQTGTVQSPKPAVGSTVCLNPPCETHETGTTNTPSQASS
NMAGNQTGTVQRVCSNPPCETHETGTTNTATTATADGADSATSSTETPSTTASETTPATI
QSRAITTVTQSTPAPGPSVPSILSITEGAAGSTEEPMQTDAATEGGETAMETGLSPELAE
GQMGTGLSAEELAVTAAVEAAAQAAATEEAQALAIQAVLQAAQQAVMNEGDSGSTGQQAI
TIPIVLTQQELAALVQQQHQLQEAQAQAQAQAQAQQQGNAQALPTEGLAPADSLNDPASE
SNGHPKMAAAVSSAVASLLPRTSTETLAPSSTLAVASPAKLQAAVAEVANGIEGGKLNPQ
PAPIKTLVKKENQWFDVGIVKVTNMVVTHFFIPEDDSQVEDDSGAIPDYNQMKKMELQPG
TAYKFRVAGINACGRGSFSEISAFKTCLPGFPGAPCAIKISKSPDGAHLTWEPPSVTSGK
IIEYSVYLAIQSTQTAEPKASTPAQLAFMRVYCGPNPSCLVQSSSLSNAHIDYTTKPAII
FRIAARNEKGYGPATQVRWLQESSKDGASAKPAPKRPVSSPDAKVAGQKKARTDQ
NT seq 4848 nt   +upstreamnt  +downstreamnt
atgactggttccatggtgtctgggaccactggttcaactttacagccacgatggaagcgg
gtactgggatggtctggccctgtccctcggcccagacatggtcacagagccgttgctata
aaggaattgatggttgtttttggaggaggaaatgaaggaattgtggatgagttgcatgtc
tacaacacagcaacaaaccaatggtttatccctgcggttcgtggtgatattccccctgga
tgtgctgcatatggttttgtttgtgatggcacccggcttctggtgtttggtggaatggtg
gaatatggaaaatacagcaatgatctctatgagctacaggccagtagatgggaatggaaa
aagttgaaagctaagactcccaaaaacggcccacctccatgtcctcgacttggtcacagt
ttctcgctggtgggtaacaagtgctacttgtttggaggactggctaatgacagcgaggac
cccaaaaacaacatccccagatacctaaatgatctgtacaccctggagcttcgtgctggc
tccagtgttgtgggctgggatataccaattacttatggtgttttgccgcctcctcgcgag
agccacactgccgtagtgtacacagaaaaggacagcaagaaatctcgcctgatcatctat
ggagggatgagtggctgtcgtctgggagatctatggacccttgacatcgacaccctgacc
tggactaagccatcagtgaatggcacagcacctctgcccaggagtcttcactctgccacc
accatcacaaacaagatgtttgtgtttgggggatgggttcccctggttatggatgatgtg
aaggtggccacacatgagaaggaatggaagtgcacaaacacactggcctgcctaaatctc
gactccatggcctgggaatcagtggtgatggatactctggaggacaatatcccaagggcc
cgggcaggacattgctctgtggccatcaactctagattgtatgtctggagtggccgtgac
ggttaccgtaaagcatggaacaaccaagtctgctgtaaagacctctggtaccttgaaaca
gagaggccacacgctccctcgagagtgcagctagtccgtgccaacaccaactccctggag
gtaagctggggcgctgtgtccaccgcagacacctatctgctgcagctacaaaagtacgac
attccagctgccactgctgtgacctcgcaggccctcaatgccgccacctctctgcaaggg
aacttgcctaagagcccagccacagctgctccctctgctcagaacctaccacacacagct
atcttgaaggttgcagcgcctccgtctggcacgggtacctcccttgtcactgtgcgaccc
aaccaggctgggaaatcccctgtcactgtgacatcacttcttccaggagttcgcatggtt
gttcctgctcagaccgcccaaggaacaccagttggcagcagccctcagatgagtggcatg
gcagctttggctgcagctgcagcagccacacaaaagatcccaccctcttcaagcactgta
ctcaacattccagcaggtgccacccttgtcaaaaccatggctgtctcccctggctccacc
acagtcaaaatggcatctcctctcatggttagtaacccagccactcgcatgctgaagaca
gctgcagctcagttgggcatagcgaccgtatcgtcacccaactcgcccaacagacccatc
atcactgtgcacaagtcgggcacggttaccgtagcccagcaacaccaggtggttaccacc
atggtgggaggagtcaccaagaccatcaccctggtcaagagccccctcacaatgggaggc
agcggcactttgcagatctccaaccttggcaagatgatgtctgtggtacaaaccaagcca
gtgcagacatcggctgttacaggccaggcttccactaaccctctcacacagctcatacag
accaagggttctctccctgccggcaccatactgaagctggtgacctcagcggacggcaag
cccaccaccatcatcaccacatcccaggcgggaggaacagggaacaaaccgaccatcctg
aacatcagcggcatgtcgcccaccacaaccaaacagggcaccaccatcatcaagaccatc
cctatgtctgctattatgacccagcctggagcaacagtgaccagcagcacagggaagacg
ccctataccatcatcaccaccaagatgatgaccactggcactccaggcaaaatcatcact
accatgcccaagcttggcactgcaactggccagcaagggctgacacaggtggttttgaag
ggagctccgggccaacctggcaccattctgcgcactgtacccatgggtggagtccgactc
gtcaccccggtcacgatgtcttctgtcaagcccaatataactacactggtcgtcaaggga
acaactggtgtcaccaccctggggactgtcacagggacagtctcctccagtctggcaggg
agcattgtagccagtgccaatgcttctctggcaactccaatcaccaccctgggaaccatc
gccaccctgtccagtcaagttatcaaccccactgccatcactgtgtcagcagcccagacc
agtctgaccacagctactaccctttccacttccaccatgtcggcaaaccagccaacccag
gtgactctcatcaccacccccagcggggttgaggcccagccagtgcaggacctgcctgtg
tccttcctggcctcccccacctctgagcagccctcttccactgaggttggggatgcccct
ggcactgtcaccatggtctgctccaaccccccctgtgagacccacgaaacaggaaccacc
aacaccgcaaccacagcctcctccgatataggtggggtgcagagggtctgctccaacccc
ccttgtgagacccacgagacgggcaccaccaacactgcaacgactgcctccactgacatg
ggcggggcaatgaggacgtccaactcttcttcctccggaaccgccacaggcaaccaggga
ccagagaacctgagcaccggcaccacattcacccccaccacggcatgctccaacatgggc
tcagcccagaccggaactgtgcagagtcccaagccagccgtgggctctacggtgtgctta
aacccaccctgcgagacccacgaaactgggaccaccaacaccccgtcccaggccagctca
aacatggccgggaaccagacagggacggtgcagagggtgtgttccaaccccccctgtgaa
acccacgagactggcaccaccaacacggcaacaactgccacagcagatggagcagacagt
gccaccagcagtacagagactccttccaccactgcatcagaaacaaccccagccaccatc
cagagcagagccatcactactgtgacccagtccacaccagccccggggccctcagtacct
tccattttgtcgatcactgagggtgcagcaggttccacagaagagcccatgcagacagac
gcggccacggaggggggagagacagctatggagactgggctgtccccagagctggcagag
ggacagatggggacaggtttgtctgcagaggagctagctgtgaccgcagcggtggaggca
gcggcgcaggctgcagccacagaggaggcccaggccctggccattcaggcagtcctccag
gcagcacagcaggcagtcatgaacgagggtgattctggctcgaccggacagcaggccatc
acaatccccatcgtcctgacccagcaggagttggcagccttggtccagcagcagcaccaa
ctccaggaagcccaggctcaggcccaggcccaggctcaggcccagcagcaaggaaacgcc
caggccctacccactgagggccttgcccccgcagacagcctcaacgaccctgcgtctgag
agcaacgggcaccccaagatggctgcagctgtctccagcgctgtggcatcactgctgccg
cgcacatccactgagaccctggccccctcaagcacattggctgttgccagtccagccaag
ctgcaagctgctgtagcagaggtggccaatggcattgagggtgggaagctaaaccctcaa
ccagcccctatcaagactcttgtcaaaaaagagaaccagtggtttgacgttggcatcgtc
aaggtgacaaacatggtggttacgcacttcttcatcccagaggacgattctcaagtagag
gatgactcgggcgccatcccagactataaccagatgaagaaaatggagctgcagcctggc
acagcttacaagttccgtgtcgctggcatcaacgcttgtggtcgtggttccttctcagag
atatctgcttttaagacttgtttaccaggcttccctggagcaccttgtgccatcaaaatc
agcaagagcccagatggtgcccacctcacctgggagcctccctcggtgacatcagggaag
atcattgagtactctgtgtacctggccatccagagcacccagacagctgagcccaaggcc
tccaccccagcccagctggccttcatgcgggtgtactgtgggcccaacccctcctgcttg
gtgcagtcctccagcctctccaatgcccacatagactacaccaccaagcccgccatcatt
ttccgcatagctgcgcgcaacgagaagggctacggccctgccacacaagtccgatggctg
caagagtccagcaaagatggagcctcggcaaaacctgccccaaaaagaccagtttcctcg
cctgatgctaaggttgctggtcaaaagaaagcaagaacggaccagtga

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