KEGG   Salvelinus namaycush (lake trout): 120065088
Entry
120065088         CDS       T07522                                 
Name
(RefSeq) ras-related protein rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh04137  Mitophagy - animal
snh04140  Autophagy - animal
snh04144  Endocytosis
snh04145  Phagosome
snh04148  Efferocytosis
snh05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:snh00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120065088
   04145 Phagosome
    120065088
   04140 Autophagy - animal
    120065088
   04137 Mitophagy - animal
    120065088
   04148 Efferocytosis
    120065088
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    120065088
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:snh04131]
    120065088
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:snh04147]
    120065088
   04031 GTP-binding proteins [BR:snh04031]
    120065088
Membrane trafficking [BR:snh04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    120065088
Exosome [BR:snh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120065088
  Exosomal proteins of other body fluids (saliva and urine)
   120065088
  Exosomal proteins of colorectal cancer cells
   120065088
  Exosomal proteins of bladder cancer cells
   120065088
GTP-binding proteins [BR:snh04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    120065088
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU Gtr1_RagA RsgA_GTPase ATP_bind_1 cobW PduV-EutP nSTAND3 Septin AAA_16 NTPase_1 AAA_7 AAA_22 AAA_24 G-alpha AAA_5 ATPase_2 NACHT NB-ARC AAA_14 SRPRB ABC_tran ATP-synt_ab
Other DBs
NCBI-GeneID: 120065088
NCBI-ProteinID: XP_038871731
UniProt: A0A8U1F8X4
LinkDB
Position
Sna20:complement(16651065..16658313)
AA seq 207 aa
MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
ELYNEFPEPIKLDRNERSKPSAEACSC
NT seq 624 nt   +upstreamnt  +downstreamnt
atgacgtctaggaagaaagtactacttaaagtaatcattctgggagactctggagttggg
aagacttccctgatgaaccagtatgtgaataagaagttcagtaaccagtacaaagccaca
attggagctgatttcctgacgaaagaagtgatggtggacgacaggcttgtcaccatgcag
atctgggacacagcggggcaggagaggttccagtctctgggtgtggcgttctaccgcggg
gcagactgttgcgtgctggtgtttgacgtgaccgcccccaacaccttcaagaccctagac
agctggagggacgagttcctcatacaggccagcccccgagaccccgagaacttccccttc
gtggtgctaggcaacaagattgacctggagaacagacaggtgacgactaaacgagcacag
gcctggtgtcagagcaagaacaacatcccctacttcgagaccagcgcaaaggaggccatc
aacgttgaacaggctttccagactattgcacgcaatgctcttaaacaggagacagaggtg
gagttgtacaatgagttccctgaaccgataaagctggacaggaacgaacgttccaagcca
tcagcggaggcctgcagctgctga

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