Salvelinus namaycush (lake trout): 120065099
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Entry
120065099 CDS
T07522
Name
(RefSeq) membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1-like isoform X1
KO
K05631
atrophin-1 interacting protein 3 (BAI1-associated protein 1)
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120065099
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GFIT
Motif
Pfam:
PDZ
MAGI_u5
PDZ_6
MAGI_u1
PDZ_2
WW
Guanylate_kin
DUF6288
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
120065099
NCBI-ProteinID:
XP_038871745
UniProt:
A0A8U1F8E1
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All DBs
Position
Sna20:18258273..18458515
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AA seq
1619 aa
AA seq
DB search
MSKVIQKKNHWTTKVNECAVLKDARGDLNVQLLGGAENGEFAYIGQVNDGIVVYKNGKLT
EGALILEVENLSISGLPLYDVQTVINNCNGPIRLKTVRQGNKLNKDLKHYLSQRFQKSSP
DHELQQTIRDNLYRHAVPCTTRPPRHGEVPGVDYNFLPVEDFLALEQRGTLLEIGTYEGN
YYGTPKPPSQPPSGKVITSDALQDSLPGSQHSTPRRTKSYNEMQNAGIVPVDLEEDEELP
EMNSSLTGDSSEPDEHPSVRPYALRENAPSYGVINASSSTTDGSQQTHTHLSLPPTEEDP
LGPLADNWEMAYTENGEVYFIDHNTKTTSWIDPRCLNKPPKPLEECEDDEGVHTEEMDSE
LELPTGWEKIEDPVYGLYYVDHINRKTQYENPILEAKRRKQLEQQQPPEGERYIREWIED
ATLAGAPLANYTANHQETYRDTQARPPLPPLIGPKRGKPFFTRNPAELKGTFINTKLRKS
HRGFGFTVVGGDEPDEFLQIKSLVLDGPAAVDGKMETGDVIVSVNDTCVLGYTHAQVVKV
FQSIQIGSIVNLELCRGYPLPFDPDDPNTSLVTSVAIVDKEPIIINGQASYDSPSSHGSQ
TGGPVNGTRESGPHSPSSAEVASNGSHSYPSDSVTLASSIATQPELITVHMEKGDKGFGF
TIADSPAGGGQRVKQIVDYPRCRGLKEGDIIVEVNKRNVQSMSHNQVVDLLSKCPKGSEV
TMLVQRGGGVAPAKKSPKLQLARKDSQNSSVHSVSSHRSTHTDSPVHPSLATPFSESAAP
PPPSQPLPGLPPQDPQADGTIQRKPDPFKIWAQSRSMYESRLPDFQEQDIFLWRKDTGYG
FRILGGNEPGEPIYIGHIVKYGAADEDGRLRSGDELICVDGTAVVGKSHQLVVQLMQQAA
KQGHVNLTVRRKTGYGGSKGEGEVPPSPASSHHSSTQAPSLTEEKRTPQGSQNSLNTVSS
GSGSTSGIGSGGGGGSGSTVVNTALQPYDVEIRRGENEGFGFVIVSSVSRPESGTTFAGN
ACVAMPHKIGRIIEGSPADRCGKLKVGDRILAVNGCSITNKSHSDIVNLIKEAGNTVTLR
IIPGDESSNASLLTNAEKIATITTTHTAQQQATPEPRNNTKPKQESSFEFKSPQAPPPPA
PTTQPPAQDAGFYSVDLERENKGFGFSLRGGHEYNMDLYVLRLAEDGAAVRNGKMKVGDE
ILEINGESTKGMKHARAIELIKNGGRRARLVLKRGDGSVPEYDPSIDGAGPAAGVQNASE
VSTLPYNNAPSDTNAPVPHKPSRSKDKKGHHHSKHRSPEKKSKSQGGASGETRASKQSKK
KVDKSQRSGGDSHGTHHRGHRSPDKGRSRARSAENTLDSRHSQGHHNTHRSPYRSTHRNR
SPYGHRSPYRSPHRSHHHSPTRYRRTQSSDPYRQPSLDRQRHREPERPNGEMAPVLRKLP
GPVPSPFLDESLLQEPPALDRLNREAKLLREYREEHLFGEDSLLLRASNLERDYRGDSLL
SAAARGQREEILPRVNTPESDSAYKRYSSLLRGRSPERVEREPRYAPRDESPDPHHRARS
LGRDISPVRSFREPEEEEAAAPRLKEYYSTLKSNASRASKALPEPKRKAHKDGTKDLSI
NT seq
4860 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagtgatccaaaagaagaatcactggaccactaaagttaacgagtgcgcggtc
ctcaaagacgctcgcggtgacttaaatgtgcaattgctcggtggtgcggagaacggagag
ttcgcctacatcggacaagttaacgatggtatcgtggtttacaagaatggaaaattaaca
gagggggcgttgatattggaagtagagaacctctcgatctctgggttgcccctgtatgat
gtacagacagtgataaataattgcaatggtcccatcagattgaaaacggtcagacaagga
aacaagctgaataaggacctgaagcactatctgagccagcgattccagaagtcctctccg
gaccacgagctgcagcagaccatccgagacaacctctaccgccacgccgtgccttgtaca
acccgtcccccgcgtcacggagaggtgcctggggtagattacaacttcctgccggtggag
gacttcctggcgctggagcagaggggaacccttctggaaataggaacatatgaaggtaac
tattatggaacacccaagccaccgagccagccccctagtgggaaagtgattactagtgat
gccttgcaagacagcctcccgggctcccagcactccactccccgacgcaccaagtcctac
aatgagatgcaaaatgctggaatagtgcctgtagacctggaggaggacgaggaactcccg
gagatgaacagtagcttaacaggagactcaagtgaacccgacgagcacccctccgtgcgc
ccctacgccctacgtgagaacgccccgtcctacggtgtgatcaacgcgtcgtcatccacc
acggacggctctcagcagacacacacacacctcagccttcctcccacagaggaggacccc
ctgggacctctagctgacaactgggagatggcctacaccgagaacggagaggtctacttt
atagaccacaacacaaagaccacatcctggatcgacccccggtgcctgaacaaacctccc
aaacccctggaagaatgtgaagacgacgaaggggtacacacagaagagatggacagtgag
ctagagctgccaacaggctgggagaaaatagaggacccagtctatgggctttactatgtg
gatcacattaacaggaagacccagtatgagaaccctatactggaggctaagcggcggaag
cagctcgagcaacagcagccaccagaaggtgagcgctacatccgagaatggatagaggat
gccacccttgctggtgcccccctggccaactataccgccaaccaccaggagacctacagg
gacacccaagccagacccccactgccgcccctcatcgggccaaaacgagggaagcccttc
ttcacgaggaacccggcggagctgaagggaacctttatcaacaccaaactaaggaagagc
caccgagggttcggcttcaccgttgtcgggggcgacgagcctgatgagttcctacagatc
aagagtctggttctggatggacctgctgccgtcgacggcaagatggagacaggtgacgtg
atcgtgagtgtcaatgacacatgcgtactgggctacacccacgctcaggtggtgaaggtc
ttccagtccatccagatcggctccatcgtcaacctggagctttgccgcggctaccccctg
ccctttgacccagacgaccccaacactagcctggtgacctccgtggccatcgtggacaag
gagcctatcatcatcaacggccaggcgagctacgactctccgtccagccacggcagccag
accggaggccccgttaatgggacgagagagtcaggaccccacagcccctcctctgccgag
gtggcgtccaacggctcgcacagttaccccagcgactctgtgacgctggcgtcatccata
gcgacgcagccggagctgatcacagtgcacatggagaagggagacaaaggctttgggttc
accatcgcagacagccctgcagggggaggacagagggtcaaacagatcgtagactacccc
cgctgcaggggcctgaaggagggggacattatcgtggaggtgaacaagaggaacgtccag
agcatgagccacaaccaggtggtggacctgctcagcaagtgccccaaaggaagtgaggtc
accatgctggtgcagagaggtggaggggtggctcctgcaaagaagagcccaaagctgcag
ttagcgaggaaggacagtcagaacagttctgtgcacagtgtttccagccaccggagtacc
cacactgactcccctgtgcacccgtccctggccaccccattcagcgagagcgccgccccc
ccacccccctcccagcccctgcccggcctgcctccccaggaccctcaggcagacgggacc
atccagaggaaaccggaccccttcaagatctgggcccagtccaggagcatgtatgaaagt
aggctgcctgatttccaggagcaggacatcttcctgtggagaaaggacacgggctacggg
ttccggatcctgggagggaacgagccaggagagccaatctacatagggcacatagtgaag
tacggggcggcggatgaggacgggcgcctgcgttcgggggatgagctcatctgtgtggac
ggcacggcggtggtggggaagtctcaccagcttgtggtacagctgatgcagcaggccgcc
aagcagggccacgtcaacctcactgtgcgacggaagaccggctacggcgggtctaaaggg
gagggcgaggtgcccccgtccccagcctcgtcccaccacagcagcacacaggccccctcc
ctgaccgaggagaagcggaccccccagggcagccagaactccctcaacactgtcagctcc
ggcagtggctccaccagcggcatcggcagcgggggcggtgggggctcgggtagcaccgtg
gtcaacactgccctgcagccctacgacgtggagatccgccgcggggagaacgagggcttc
ggatttgtgattgtttcctctgtgtcccgacccgagtctggcaccacctttgctggaaat
gcatgtgtggccatgccccacaaaataggtcgtattattgaggggagccctgcggaccgc
tgtgggaagctgaaggtgggagaccgtatcctggccgtcaacggctgctccatcaccaac
aagtcccactcggatatcgtcaacctgatcaaggaggccgggaacacggtcacgctaagg
atcattcccggagacgagtcctctaatgcatcactgctgaccaacgctgagaagatcgcc
actataacaactactcacacagcccaacagcaggctacacctgagcccagaaacaacacc
aaaccaaaacaggagtcctcttttgagttcaaatccccccaggcccctcctccccctgcc
ccaacaacacaacctccagcccaggatgctggcttctactcggtggacctggagagggag
aacaaaggttttgggttcagcctgagaggaggtcatgagtacaacatggacctgtatgtg
ctgagattagctgaggacggagcagctgtacgcaatggcaagatgaaggtgggagatgag
atcctggagataaacggtgagagcaccaagggcatgaagcacgcccgcgccatcgaactg
attaaaaacggcggccgccgcgcccgcctagtcctcaaacggggcgacggctcggtgcct
gaatatgaccccagcatcgatggtgccggcccagccgcaggggtacaaaacgcttcggaa
gtgagcaccctgccctacaacaacgcaccatcggacactaacgcaccagtccctcacaaa
ccatcacggagcaaggacaagaagggccaccaccattccaaacaccgatccccggaaaag
aagagcaagagccagggaggggcgtctggggagacgagggcctccaagcagtccaagaaa
aaagttgacaagagccagaggtctggcggggatagccatggcactcaccaccgaggacac
cgctccccggataagggccgtagccgggcccgcagcgcagagaacaccctagacagtaga
cacagccaagggcaccacaacacccaccgctctccctacaggtccactcaccgcaatcgg
tccccctatggccaccggtccccctaccgctccccccaccgctcacaccaccactcccct
acccgctaccgtcgtacccaatcctcagacccctaccggcagccctccctagacagacag
agacacagagagccagagaggcccaacggggagatggcaccagtgctgaggaagcttcct
ggccctgtgcccagccccttcctggatgagagcctcctacaggagcccccagccctggac
cggctcaacagggaggccaagctactgagggagtacagagaggagcacctgtttggggag
gacagccttctgctgagggcctccaacctggagcgtgactacagaggagacagcctgtta
tctgctgctgcccgtggccagagagaggagatccttcccagggtcaacacccctgagtca
gacagcgcctacaagaggtacagctcactgctgaggggccgctcgcctgagagggtggag
agagagccgcgctacgcccccagggatgagtccccagacccccaccatagagcccgtagc
ctgggccgagacatttcacctgtcagaagcttcagagaaccggaggaggaggaagcggca
gcacccagactaaaggagtattacagcacacttaagtctaatgccagccgtgcttccaaa
gctctcccggagcccaagcggaaggcccataaagatggcaccaaagacctgagcatctga
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