Salvelinus namaycush (lake trout): 120065127
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Entry
120065127 CDS
T07522
Symbol
arhgef10la
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like protein
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120065127 (arhgef10la)
03036 Chromosome and associated proteins [BR:
snh03036
]
120065127 (arhgef10la)
Membrane trafficking [BR:
snh04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120065127 (arhgef10la)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
120065127 (arhgef10la)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
Beta-prop_RSE1_2nd
CFAP43_N
IQ_SEC7_PH
WD40_CDC20-Fz
RHG20_PH
SOS1_NGEF_PH
DUF7675
Motif
Other DBs
NCBI-GeneID:
120065127
NCBI-ProteinID:
XP_038871813
UniProt:
A0A8U1F9D0
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All DBs
Position
Sna20:complement(22772097..23081304)
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AA seq
1062 aa
AA seq
DB search
MLYEDVHREEGPQGAGNDWSSSEFESYEEQSDTECKLPTLSKVHQLMNAARSGTKDGLDK
TRIAFMRKVSFLHKKDHSEDVEDDAGYLDVAVSDVKHPPAQLSPMPEGLSSQQVVRRHIL
GSIIQSERSYLESLRRILEEYQRPLLEGDPRILSPRKIRPVFYRLREITQCHSMFQIALA
SRVAEWDSSEKIGDLFVASFSKSMVLDVYSDYVNNFTNAMALIKKACMSKPAFLEFLKKK
QASSVDRITLYGLMVKPIQRFPQFILLLQDMLKNTPKGHVDRLPLQLALTELEMLAEKLN
EQKRVADQIAETQQLARSVSDRSLSKQLNSDQGLLVLCETLIETVYGERGQVLKSKERKV
FLFNDILICANINVKGPLDISSLVPVGPKYTMKWSAPLLQVQVLEVGQEASQAKETLFQH
GGAKHPGSACPPGKVILGPPRLYQELQDLQHDLSVVEEVTLLVGTLQGTYQNLNTTVAQD
WCLALQRLIRIKEDQLQSANKCRLRLQVPGRPDKSGRPVSFMVVFNTPSPLSKISWVNRL
HLAKIAQREENTPGWFCAEDEGKTMSPFWPLLACRVPVFTTKSSDRKLEAALHNPVQVSA
GCTLLPQGYLWVASGGDVTQGQVEIFSLNRPTLRPVKSFQVGAPVRCLEYVPEPRPSEEV
EAVAFRSFTGVGNIICLGLDDGSILVYGSVNTEAQCLLNLRNPHSCPVLCLKHCTNFLFA
GLRDGTMMVYGRSNGGELWEPDSCRTVIVGPEPVRTLLELEDSMWASCANSVTVIKGSSL
ATQRFEVHPDPMVTVAHMVRAGGGVWMAFSEGSSIRLFHTETLEHLQEINISTRVSLHNP
GQKSMRVTSLLIYQGLLWVGTVQGIIITLPVPKLEGIPKITGKGMTSLNAHCGPVDFLVA
TSSTLSPELLKRDSMADGPDAACGEEDRSDSSSQESLPQSGSSQGEGVGKGRGVLLQYRL
RSTSGLPGRPLTARGDEASDSSLESLEHSLEDGSIYEFSDDPEMWVQGHPCKRDGGRRDR
VISAAVISGGRGFHRLREGTTERAGVESSETTLMVWQLPLTV
NT seq
3189 nt
NT seq
+upstream
nt +downstream
nt
atgctctatgaggatgtgcacagagaagaagggccccagggtgcaggcaatgattggagc
tccagtgagtttgagagctacgaagagcagtctgataccgagtgcaaactaccaaccctc
agcaaggttcatcagctaatgaatgccgccaggagtgggaccaaggatggactggacaag
accagaatagcctttatgcggaaagtctccttcctgcacaagaaggaccactcagaggat
gtggaggatgacgcagggtacctggatgtggctgtgtcagatgtgaaacatcctcctgca
cagctgagccctatgcctgagggactgagcagccagcaggtggtcagacgtcacatcctg
ggctccatcattcagagtgagcgcagttatcttgaatccctcaggagaatccttgaggag
taccagaggcccttgctggagggggacccacgcatcctgagcccacggaagatccggcct
gtattttaccgcctacgggaaatcactcagtgtcactccatgttccagatcgcactggcg
tcacgtgtggctgagtgggacagcagtgagaagattggggacctatttgtggcctcgttt
tctaagtcgatggtgctagatgtttacagcgactatgtcaataacttcaccaatgccatg
gccctcataaaaaaggcatgcatgtccaaaccagctttcctggaattcttaaagaagaag
caggcgtccagtgttgaccggatcaccctgtacggcctcatggtgaagcccatccaacgc
tttccccagttcatccttttactgcaggacatgctgaagaacacacctaagggtcacgta
gaccgcctgcctctgcagctggctctgactgaactggagatgctggccgagaagctgaat
gaacagaagcgtgtggccgaccaaatagctgagactcagcagctagcacgcagtgtcagc
gaccgctcgctcagcaagcaactgaactcagaccaggggttgctggtgctttgtgagact
ctgattgagacggtgtatggggagcgaggccaggtcctgaagtctaaggagcgcaaagtc
ttcctcttcaacgatatcctcatctgtgccaacatcaacgtcaaggggccccttgatatc
agcagcctagtccctgttggtcctaaatacaccatgaagtggagtgcccccctgctgcag
gtccaggtactggaggtgggtcaggaggcctcccaggccaaggagaccctgttccaacat
ggcggtgccaagcaccctggcagtgcctgtcccccagggaaagtgatcctgggtcctcca
cggctttaccaggaactccaggacctgcagcatgacttgtctgtggtggaggaggtcaca
ctactggtgggaacactacaggggacataccagaacctgaacacgactgtggcccaggac
tggtgtctagctctacagagactcattcggatcaaggaggatcaacttcagagtgccaac
aagtgccgcttacgcctgcaggtgcctgggagaccagacaagtcgggacgtcccgtcagc
ttcatggtggttttcaacacccccagccccctcagcaagatctcctgggtcaaccggctg
cacctggccaagattgcgcagcgagaggagaacacaccaggatggttctgtgcagaggat
gaagggaagaccatgtcaccattttggcctttactggcctgccgtgtgcctgtctttacc
accaaatcctcggacaggaagcttgaagctgcccttcacaatccggtacaggtctctgca
gggtgcaccttgctacctcaaggctacctctgggtggccagcggaggggatgtcacccag
gggcaggtggagatattctccctgaacaggcccacactgcgcccagtgaagagcttccag
gtgggggccccagtgaggtgtctggagtatgtgcctgaacccagaccctcagaggaggtg
gaggctgtagctttcaggagctttactggggtggggaacatcatctgtttgggactagat
gatggaagcatcctggtgtatggcagtgtaaacactgaggcccagtgcctgttgaacctg
cggaaccctcatagctgccctgtcctgtgcctcaaacactgcaccaacttcctgtttgct
gggctcagggatggaaccatgatggtctatggaagaagtaatggaggtgagctgtgggag
ccagactcctgcaggactgttattgtgggcccagagccggtgcggactcttctggaactg
gaggactctatgtgggccagctgtgccaactctgtgaccgtcatcaagggctccagcctt
gccacccagaggtttgaggtgcacccagaccccatggtgaccgtggcccatatggtgcgg
gctgggggaggagtttggatggcctttagtgagggctcttctattcgcctgttccacact
gagacactggagcatctgcaggaaatcaacatctccacgcgagtatctttgcacaaccca
ggccagaagagcatgcgtgtcaccagcctactcatctaccaggggctgctgtgggtgggc
actgttcagggaatcattatcactctgcccgtgcccaaactggagggcatccccaaaata
acaggaaaggggatgacctctctgaatgcccactgtggtccggtggacttcctggtggcc
acgtccagcaccctgtccccagagctactgaagagggattctatggcggacggacccgac
gctgcctgcggagaggaggaccgcagtgactcctcctcccaggagtctctgccgcaatca
ggttcctcccagggggagggggtgggcaaggggcggggtgtgctgctacagtacaggttg
cgctccacttcggggttgccagggcgaccgctaacggcgaggggcgatgaagcatcggac
tcctccctggagtctttggagcacagcctggaggacggctcaatctatgagttcagtgac
gacccagagatgtgggtgcaggggcacccctgtaagcgggacggggggcgcagggacaga
gtgatctcggcagcggtcatatctgggggcaggggtttccacagattgagggaagggaca
acggagcgggcgggggtggagtcttcagaaaccaccctgatggtatggcaactaccactg
acagtgtga
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