Salvelinus namaycush (lake trout): 120065130
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Entry
120065130 CDS
T07522
Name
(RefSeq) claudin-19-like
KO
K06087
claudin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03272
Virion - Hepatitis viruses
snh04382
Cornified envelope formation
snh04514
Cell adhesion molecules
snh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
120065130
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
120065130
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
120065130
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
120065130
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
snh03037
]
120065130
04147 Exosome [BR:
snh04147
]
120065130
04515 Cell adhesion molecules [BR:
snh04515
]
120065130
Cilium and associated proteins [BR:
snh03037
]
Other cilia and associated proteins
Stereociliary proteins
120065130
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
120065130
Exosomal proteins of colorectal cancer cells
120065130
Cell adhesion molecules [BR:
snh04515
]
Immunoglobulin superfamily
L1 family
120065130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Motif
Other DBs
NCBI-GeneID:
120065130
NCBI-ProteinID:
XP_038871818
UniProt:
A0A8U1H637
LinkDB
All DBs
Position
Sna20:22993029..23004035
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AA seq
209 aa
AA seq
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MANSGFQLLGYFLALGGWIGIISTTVLPQWKQSSYAGDAIITAVGLYEGLWMSCASQSTG
QVQCKVFDSMLSLDVHIQTCRALMVVSVLLGFIGMIVSVVGMKCTKVGDNNPISKGRIAV
SGGALFLLAGLCTMVSVSWYATQVSYQFFNPNTPINARYEFGSALFVGWAAASLTVLGGS
FLCCSCSNEERRGQQYYRQSQPSTAREYV
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggcgaactcgggtttccagttgctaggttacttcctggcattgggtggttggataggc
attatctccaccactgtgctgccgcagtggaagcagtcttcgtacgcgggtgacgccatc
atcacggctgtggggctctacgaaggcctgtggatgagctgtgcctcacagagtacggga
caggtgcagtgcaaggtgtttgactccatgctgtcactggacgtgcacatccagacgtgt
cgtgctcttatggtggtgtccgtgctactgggtttcataggaatgatagtgagtgtggtg
gggatgaagtgcactaaagtgggcgacaacaaccccatctccaagggacgcatagctgtg
tctggaggagccctcttcctgctcgcaggtctgtgcacgatggtgtctgtgtcctggtat
gccactcaggtgtcctatcagttcttcaacccaaacacgccaatcaatgccaggtatgag
tttgggtctgccctgttcgtgggatgggcggcagctagcttgactgttttgggcggatcc
ttcctgtgttgctcctgctccaatgaggagaggcgagggcagcagtactaccgccaatca
caaccatccacagccagggagtatgtgtaa
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