Salvelinus namaycush (lake trout): 120065144
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Entry
120065144 CDS
T07522
Name
(RefSeq) sortilin-like isoform X1
KO
K12388
sortilin
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120065144
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
120065144
NCBI-ProteinID:
XP_038871842
UniProt:
A0A8U1F8F3
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Position
20:complement(24917391..24942195)
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AA seq
815 aa
AA seq
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MTPLYSIAVVWLFTYALCEDFCKKANFFGGAHTTFAKTPRPRDSPVLSGHNLNKRSTDPD
GETCKSLTGFESTLKNNTHTYAFNDLSGSVSLAWVGDGTGVLLVLTTFQVPVFMIRLGQS
KLYRSEDYGKTFQDVTHLINNTFVQTEFGIAIGPDNSGRVIMTGDVSEGGGSRIFRSLDY
GHSFSPADLPFFPLIQTLYNPNDSNVLLTLSITLELWLSEDFGSTWRKIHDSVCLVRWGP
EDSIYFTTNSNGSCNDKGMLELKRSLDYGKNIKTIASKIYSFVLGGCFVFASIMTGSGTQ
RMIHVSVDGGDVWNMAQLPTVGHEQFYSILAASDDMVFMHVDEPGDTGIGTIYISDDRGT
LYSKSLERHLYTATGGDTDFTNVTSLRGVYMTSVLTEDGSVETVVSFDQGGEWRPVQRPR
NSRCDTETATNRPDRCSLHIHALYSISMKMNVPLLPLTQFNAIGLILAHGSVGDPASVLS
PDVYVSDDGGYSWLRALTGPHHYAILDSGGLLVAVEHTSAPVNQIKFSTDEGQCWHVYNF
TSEPLYFTGLALEPGAHSMNLSLWGYRVGLQGPLSHYWVSVTIDFKQLLSRDCGEGDYVQ
WLAHSDDLNNPNDGCILGYKERFLRLRKDSVCWNGRDYVITTQPTPCPCTLDDYQCDYGY
YRAENSSECVEQADLKGHVLEFCLHGTTEQLQTSGYRKIPGDRCEGGIQPKRKEIDLRRN
CISNALHPKPLTEANLLSSASIVVVVMVILLISAATGVMLVKKYVCGGRFLVHRYSVLQQ
HAEANGIEGVDELDAHTTEMGKTHYHEDSDEDLLE
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atgactccgctgtatagcatcgctgttgtctggttatttacctatgcgctatgcgaggat
ttctgtaagaaagccaacttcttcggcggggcacacacaacgttcgcgaagaccccgcga
ccgagagattcgccggtgttgtctggacacaaccttaacaaacggagcactgaccccgac
ggagagacgtgcaaatctctaacgggattcgagtccacgctgaaaaataacacacacacc
tatgccttcaatgacttgagtggctcagtgtctctggcctgggtgggagatggcacaggg
gtgcttctggtgctaaccacattccaggtgcctgtcttcatgattcgccttggccagtct
aaactctaccgcagcgaggactatggaaagacattccaggacgtgacccacctgatcaac
aacacctttgttcagactgagtttggcatcgccattggtcctgacaactctggcagggtg
atcatgacaggtgatgtgtcagagggagggggatcccggattttccgctcgctggattat
ggacatagtttttccccagcggacctccccttctttcctctgattcagacactgtataac
cccaacgacagtaacgtgctactgaccctcagcatcacgttggaactgtggctgtctgaa
gactttggctccacctggaggaagatccatgacagcgtgtgtctggtcagatggggtcct
gaggacagcatctacttcaccacaaactctaacggatcctgcaatgataagggcatgttg
gagctgaagaggtctctagactatggcaagaacatcaagaccatcgccagcaagatctac
tccttcgtactgggaggatgctttgtcttcgcctccatcatgactggctcgggtacccag
cgtatgatccatgtgtcggtagatggtggtgatgtgtggaacatggctcagctccctact
gttggccatgagcagttctactccatattggcagccagcgacgacatggtgttcatgcac
gtagacgaacctggagacactggcatagggaccatctacatatcagatgacagagggacg
ctctactccaagtctctggagcgccacctctacacggccacagggggcgacactgatttc
accaacgtcacctcgctcaggggtgtctacatgaccagcgtactcacagaggacggctca
gtggagactgtggtgtcgtttgaccaggggggggagtggcggccggtacaacggcctcga
aacagccgctgtgacactgagaccgccaccaaccgcccggaccgatgcagcctgcacatc
cacgccttatacagcatctctatgaaaatgaacgtccctctgctgcccctcacacagttc
aacgctataggcctcattctggctcatggtagtgtgggtgacccagcgtctgtgctgtct
cctgatgtgtatgtgtctgatgatggaggctactcctggctgagagcgctaaccggaccc
caccactacgccatcctagactctggaggccttttggtggctgtcgaacacacatctgca
cccgtcaaccagatcaagttttccacagacgaaggccagtgttggcatgtgtataacttc
accagtgagccgctgtatttcacagggctggcattggagcctggagcccactccatgaac
ctcagcctgtgggggtacagagtgggcctgcagggtcccctcagtcactactgggtctct
gttactattgacttcaaacagctactctccagagactgtggggaaggagactatgttcag
tggttggcgcactctgatgacctcaacaaccccaatgacggatgcattctgggatataag
gagcgtttcctgcggctgaggaaagattctgtctgctggaacggacgtgattatgtcatc
accacccagcccaccccctgcccctgcacactggacgactaccagtgtgactatgggtac
taccgtgcagagaacagttctgagtgtgtggagcaggcagacctgaagggccatgttctg
gagttctgtcttcacggcaccacagaacagctgcagaccagcggctaccggaagattcca
ggcgaccggtgtgagggtgggatccagcctaagagaaaggagattgatctgaggagaaac
tgcatcagcaatgcacttcacccaaaacccctgacggaggccaacttgttaagctctgcc
tctatagtagtggttgtaatggtgattctgctcatcagcgctgccacaggagttatgctc
gtcaagaaatatgtctgcggagggaggttcctggtacacaggtactcagtgctacaacag
catgcagaggccaatgggatagagggagtggatgaactggacgcacacaccaccgagatg
ggcaaaacacactaccacgaagactcagatgaggacctcttggagtga
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