Salvelinus namaycush (lake trout): 120065216
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Entry
120065216 CDS
T07522
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4-like isoform X1
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120065216
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120065216
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120065216
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120065216
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120065216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
DUF1609
Motif
Other DBs
NCBI-GeneID:
120065216
NCBI-ProteinID:
XP_038871944
UniProt:
A0A8U1F9X4
LinkDB
All DBs
Position
Sna20:29726012..29759406
Genome browser
AA seq
1007 aa
AA seq
DB search
MMAEGGGPELGSAADPDPESVAAQIPTPSTESQKQSIGTLLKTTLRKSDEWFLIDSRWFK
QWKKYVGFDSWDMYNVGEHNLYPGPVDNSGLFSDHETQILKEHLIDELDYVLVPTEAWNK
FVSWYGCLEGQRPIVRKVVEHGMFVKHCKVEVYLLELNLCENDNMDNVVTRHFSKADTID
TIEKEMRSLFEIPMGKETRLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIECKNEDGT
WPRQASHPKSSTATSRNFTTSPKLSSNSSATISSTVTNGDSSSNSGYTLNNSTSSGNRLG
GYNSYSSSYNYRESPSQPGLCGLSNLGNTCFMNSALQCLSNACPLTEYFLDDQYEAEINR
ENPLGMRGEIAEAYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFL
MDGLHEDLNRVKKKPYLALQDAGGRPDEIVAKEAWTNHRLRNDSVIVDIFHGLFKSTLVC
PECAKISVTFDPFCYLTLPLPMKKDRTMEVFLVRIDPQSRPTQYRVVVPKLGLVTDLCSA
LSRLSGILAENMVVADVYNHRFHKIYRRDDGLNQIMEKDDIFVYEVAEEDRERMNLPVYF
RERHSKHTGGSTGTMLFGQPLLITVPRQNLAADMLYEKVLERIGRYVNRAQSSTGEGRAN
ASASSASCSLAAECSATSSNHNTAGSGSPLSEGASCSSSNGSNHSGTSNRSNGNGVCEGE
EEAMDHQVSPEPENGQSGEEEEASDLENGPKTKQCSSTPTKLFSFSMVNSYGTANISPLP
CDGNFLKLNTHSTVAIDWDSDTKKLCYDDQEAEAYEKHESMLQAQKKKATVALRECMELF
TTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRFSYNRCWRDKLDTVVDFP
VRDLNMSEFVCDPKAGPYVYDLIAVSNHYGGMGGGHYTAYGKNKADGKWHYFDDSSVSAA
SEDQIVTKAAYVLFYQRRDAGDVPAKPPPSASLGGATAEAADHMDTN
NT seq
3024 nt
NT seq
+upstream
nt +downstream
nt
atgatggccgagggaggcggacccgagttgggtagcgcggcagaccccgaccccgagtct
gtagccgctcaaataccgacaccttcaaccgagagtcaaaaacagagtattggaacactt
ctcaaaacaactctacgaaagagcgacgagtggtttctgattgatagtcggtggttcaag
cagtggaagaaatatgtgggatttgacagttgggatatgtacaatgttggagagcacaat
ctctatcccggccctgttgacaactctggcctgttctcagaccatgagactcagatcctg
aaggagcaccttatagatgagctggactatgtccttgtgcccactgaggcgtggaacaag
tttgtcagctggtatggttgccttgagggccagcgtcccatcgtcagaaaggtggttgaa
cacggcatgtttgtcaagcactgtaaagtggaggtctatctgttggagctcaacttgtgt
gagaatgacaacatggacaatgtggtcacacgtcatttcagcaaagctgacactatagac
accatagagaaggagatgcggtcactatttgagatcccaatggggaaggagactcgactg
tggaacaagtacatgagcaacacgtacgagcagctgaacaagccagacagcaccgtacag
gatgctggtctcttccagggccaggtgctcgtgattgaatgcaagaacgaggacggcacg
tggcccagacaagcctcccatccaaaatccagtacggctacatccaggaatttcactacc
tctccaaagctctcttccaactcgtcggcaaccatctcctcaacagtaacaaatggggac
agcagcagcaactctggctatacactgaacaacagcacctcctctggcaatagattggga
ggttataattcatacagctcctcatacaactacagagagtcaccatcccaacctggcctc
tgtggtctcagtaacctaggcaacacctgtttcatgaactccgctctccagtgtctgagc
aacgcgtgccctctcactgagtacttcctggatgaccagtatgaggcggagatcaaccgg
gaaaatccattaggaatgaggggggagatcgcagaggcctacgcagacctggtcaagcag
atgtggcttagccgcagcagctatgtggctccccgcacctttaaaacccaagtgggtcgc
ttcgccccccagttttcagggtaccagcagcaggactctcaggagttgctggccttcctg
atggacgggctccacgaagacctgaaccgcgttaaaaagaagccttacctggccctgcaa
gatgcaggggggcggccagacgagattgtagctaaggaagcatggactaatcatcgcctg
cgcaatgactcagtcatcgtggacatattccatggcctgttcaaatccactctggtgtgt
ccagagtgtgccaagatctctgtgacttttgacccattctgctacctcacactccctctg
cccatgaagaaggaccgcactatggaggtgttcttggtccgcatcgacccccagtccaga
cccacgcagtaccgagtggtggtccccaagcttggcttagtgacagacctgtgcagcgcc
ttgtcccggctttctggaatacttgctgagaatatggtggtggctgatgtttacaatcac
cggttccacaagatctacagacgagacgacggacttaaccaaatcatggagaaagatgac
atatttgtgtatgaggtggcggaggaggacagggagaggatgaacctgcctgtgtacttc
agagagcgccactccaaacacacaggcggctccacgggtaccatgctgttcggccagccc
ctcctcatcactgttccccggcagaacctggccgctgacatgctctacgagaaggtgctg
gagaggattgggcgctatgtgaatcgcgctcagagctccaccggtgaggggagggcgaac
gcctctgcctcctcggccagctgcagcctggcagctgagtgctccgcaacatcctccaat
cacaacactgcagggagtggtagccccctgtcagaaggggcgtcctgcagctccagcaac
ggcagcaaccactccgggacctccaacaggtccaacgggaatggtgtgtgtgagggtgag
gaggaggccatggatcaccaggtgagcccggagccagagaacggacagtcgggggaggaa
gaggaagcctcagacctggagaatggccctaaaaccaaacagtgctccagcaccccgacc
aaactcttctccttcagcatggtcaactcctacggaacggccaacatcagtccactgcca
tgtgacggaaacttcctcaaactcaatacacattccacagtggcgattgactgggactcg
gacacaaagaaactgtgttacgacgatcaggaagcagaggcctatgagaagcacgagagc
atgctgcaggcccagaagaagaaagccacagtggctctgagggaatgcatggagctcttc
accaccatggagacgctaggagagcatgacccatggtattgccccacctgtaagaagcac
caacaagccacaaagaagtttgacttgtggtcgttgcctcgcatcctggtggtccaccta
aagcgtttctcctacaaccgctgctggagggacaagctggacactgtggtggacttccct
gtcagggatctgaacatgtctgagtttgtgtgcgaccccaaggccggcccctatgtttat
gacctcatagcagtctccaaccactatggaggaatgggaggaggccactacacagcctac
ggcaagaacaaagctgatgggaagtggcattactttgatgacagcagtgtctcagctgcc
tcagaggatcagattgtgacaaaagcagcctacgtgctattttaccaacgcagagacgcg
ggcgacgtccctgccaagcctccgccctcagcctctctggggggtgccaccgctgaagca
gctgatcacatggataccaactga
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