Salvelinus namaycush (lake trout): 120065249
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Entry
120065249 CDS
T07522
Name
(RefSeq) protein jagged-1b-like isoform X1
KO
K06052
jagged-1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04330
Notch signaling pathway
snh04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120065249
04371 Apelin signaling pathway
120065249
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
snh04090
]
120065249
CD molecules [BR:
snh04090
]
Proteins
120065249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
MNNL
EGF_TEN
JAG1
EGF_DL_JAG
DSL
EGF_2
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
EGF_3
DAG1
CD34_antigen
Motif
Other DBs
NCBI-GeneID:
120065249
NCBI-ProteinID:
XP_038872006
UniProt:
A0A8U1F8S8
LinkDB
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Position
Sna2:60382179..60412180
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AA seq
1245 aa
AA seq
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MILRLSSICVAFSIHVFLQCMWIKVAMASGHFELQIVSMQNVNGELQTGVCCDGSRNAAD
RKCTRDECDTYFKVCLKEYQLKVSSAGPCSFGTASTPVVGGNTFSLRSMRSDKSRIVLPF
SFAWPRSYTLIVEALDFNNASSTGSGGGEMIEKAVQSGMINPSRQWQSLKHNGPVGQFEY
QIRVSCDEHYYGFGCNKFCRPRDDFFGHYNCDHNGNKTCLEGWSGLECSTAICRQGCSTE
HGSCKLPGDCKCLYGWQGEYCDKCIPHPGCVHGTCVEPWQCLCETNFGGQLCDKDLNTCG
TLQPCLNMGTCSNTGPDKYHCACPDGYSGVNCEKAEHACLSEPCFNGGRCVETSQGFECQ
CAPGWSGPYCSINVDECFPNPCGHGGTCKDQVNGFKCTCPAQWSGKTCLIDANECEGDPC
LNANSCRNLIGGYFCECLPGWMGQNCDTNINDCQDQCQNGGKCKDMVNGYRCVCPSGFGG
EHCEKDVDECASGPCLNGGRCKDDVNGFQCLCLPGFSGNFCQLDIDYCMPSPCQNRAQCF
NLATDYFCKCPEDYEGKNCSHLKDHCRTTPCKVIDSCTVSVASNSTPGGVRLISSNVCGP
HGRCRSQAGGQFSCECQEGFTGTYCHENINDCESGPCQNGGTCIDKVSLYQCICAEGWEG
PNCDDNIDDCNTNPCRNRGTCRDLVNDFFCECKNGWKGKTCHSRESQCDEATCNNGGTCY
DEGDTFKCMCAAGWEGATCNIAKNSSCLPSPCENGGTCVVSGDSFTCVCKEGWEGLTCNQ
NSNDCNPHPCYNSGTCVDGDNWYRCECAAGFAGPDCRININECQSSPCAFGSTCVDEING
YRCLCPPARAGPRCQEVTGRPCVVNSLVAVDGTKWDDDCNTCQCHNGKVTCTKIWCGPKS
CRVHSKSHSGGECPVGQTCVPVRDEHCFVKPCPSQGECWSASHSLPPHAKCHPESNCANV
TFTFNKDTMPQGLTVEHICGELRSLYVVRNLSSEYSVSMTCEPSATANNEINVAISTEDP
RRGKAPIKEITDKFIDLVSKRNGNSTIITAIVEVCVQRRQSHNPNADYLVPLLVSVVIVV
WLLAVASAFIWCLKRRRKPSTHTGVNTQSTSPATTAEDTNNAVNNVREQLNQIKNPIDKH
GPTNGLPPVKEHPNHYHYEDKNSLINAKIRTNNSDVGGHHSDDEESEKRLQKARFPRQTP
YTLVDREERSPQPLSTAGKHPNWTNKQDNRDLESTQSLNRMEFIV
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atgattttgagactgagttcaatctgtgttgccttttctattcatgtcttcttgcaatgc
atgtggattaaggtggctatggcatctggacactttgaattgcaaattgtatcgatgcag
aacgtgaatggcgaactgcagactggcgtgtgctgcgatggatctcggaatgccgcagat
cgcaaatgcacgagggacgagtgtgatacctattttaaagtgtgtctaaaggagtaccag
ttgaaggtctcttcggcgggcccatgcagtttcgggacggcttctacacccgtggtcgga
gggaatactttttctttgcggagcatgaggagtgacaagtcgaggattgtattacctttc
agcttcgcttggccgaggtcctatacattgatcgtggaggccttggacttcaacaacgcc
tcttctacgggcagtgggggaggcgagatgatcgagaaggccgttcagtcgggcatgatc
aaccccagccgccagtggcagagcctgaagcacaacgggccggtgggccagttcgagtac
cagatccgggtcagctgcgatgagcattactacggtttcggctgcaacaagttctgccgt
ccgcgcgacgacttttttggccactacaactgcgaccacaacggcaacaagacctgcctc
gaagggtggtccggactagaatgcagcactgctatttgcaggcaaggctgcagcactgaa
catggttcctgtaaattgcccggagattgcaagtgtctgtacggctggcagggcgagtac
tgtgacaagtgcatccctcacccgggctgtgtgcacggaacctgcgtggaaccgtggcag
tgcctctgtgaaacaaactttggcggccagctctgcgacaaagacctgaacacttgtggt
acgctccagccctgtctgaacatggggacctgcagcaacactggacctgacaagtaccac
tgtgcctgtcctgacggctactctggtgtcaactgcgaaaaagcagagcatgcttgtctg
tcggagccctgttttaacggagggagatgtgtggagaccagtcagggcttcgagtgccag
tgtgcccctggctggagtggaccctactgcagcatcaatgtggacgagtgtttccccaac
ccctgtggccacgggggcacctgcaaggaccaggtcaacggcttcaagtgcacctgtccc
gcccagtggagcggcaagacctgcctcattgacgccaacgagtgcgaaggcgacccctgc
ctgaatgccaactcctgccgcaacctgattggagggtacttctgcgagtgcctccccggt
tggatgggccagaactgcgacaccaatatcaatgactgccaggaccagtgtcaaaatggg
ggaaaatgcaaggacatggtgaatgggtaccgttgcgtttgtccgtcgggcttcggcggc
gagcactgcgagaaggacgtagacgagtgcgccagtggcccgtgcttgaacggcggccgt
tgcaaggacgacgtcaatggcttccagtgcctgtgcctgcccggtttctctggcaacttc
tgtcagttggatatcgactactgcatgccgagcccatgtcaaaacagggcccagtgtttc
aacctggctaccgattacttctgcaaatgtcccgaagactacgagggcaagaactgttcc
catttgaaggaccactgtcgtaccacaccatgcaaagtgattgacagctgcacggtttcc
gtggcatccaacagcacccctgggggcgtgcgtctgatttcgtccaacgtgtgcgggccc
cacgggcgctgccggagccaggctgggggccagttcagctgcgagtgccaggagggattc
accgggacatactgccatgagaatataaatgactgtgaaagtggcccgtgtcagaacggg
ggaacgtgtattgacaaagtcagcctgtaccagtgcatctgtgccgagggctgggaggga
cccaactgtgacgacaacattgacgactgcaacaccaacccatgtcgcaaccgcggcacg
tgccgagacctggtgaacgacttcttctgtgagtgtaagaacggatggaagggcaagaca
tgtcactcaagggagagccagtgtgacgaggctacgtgcaacaatggcggaacgtgctac
gatgaaggggacaccttcaaatgcatgtgtgccgccggatgggagggtgccacctgtaat
atagctaagaacagcagctgtctgcctagcccttgtgagaacggaggcacctgtgtagtc
agtggagactctttcacctgcgtctgcaaagagggctgggagggcctgacctgcaaccaa
aattccaacgactgcaatccccacccttgctataacagtggaacctgtgtggatggagat
aactggtaccggtgtgagtgtgctgcgggattcgccggaccagactgcaggattaacatc
aacgagtgccagtcgtcgccctgcgcgttcggctccacctgcgtagacgagatcaacggc
taccgctgcctgtgtccaccagcgagggccggccccagatgccaagaagttactgggaga
ccctgtgttgtcaacagtctggtggctgtggacgggaccaaatgggatgacgattgcaac
acctgccagtgccacaatgggaaggtcacctgtacaaagatctggtgcggtcccaaatcc
tgccgggtccacagtaaaagtcacagcggtggcgagtgcccagttggtcagacgtgtgtg
cccgtccgggacgagcactgtttcgtcaagccatgcccaagccagggcgagtgctggtcg
gcctcccacagtctcccgccccatgcaaagtgccaccccgagagcaactgtgccaacgtc
accttcaccttcaacaaggacaccatgccacagggcttgactgttgagcacatctgcggt
gagctaaggagtctgtatgtggtgaggaacctctcgtcggagtactcagtgtccatgaca
tgcgagccatcagccaccgccaacaacgagatcaatgtagccatttcaacggaggacccc
agaagaggcaaggcccctatcaaggagatcacggacaaattcatagacctggtcagcaag
cgaaacggaaacagcactatcatcacagccatcgttgaagtctgtgtccagaggaggcag
agccacaaccccaatgcagactacttggtccccctgctggtgtccgtagtcatcgtcgtc
tggctcctggctgtggcctctgcgtttatctggtgcctcaagcggcgccggaagcccagc
acccacacgggtgtcaacacccagtcgacgtccccggcgacgaccgccgaagacaccaac
aacgcagtcaacaacgtgcgtgagcagctcaaccagatcaagaaccccatcgataaacac
ggtccgaccaacggcctacccccagttaaagaacaccccaaccactatcactacgaggac
aagaactctcttatcaacgccaaaattagaacaaacaactcagacgtgggtggtcaccat
tcggatgacgaggagtctgagaagaggcttcagaaggctaggttccccaggcagacgccg
tatactctagtggaccgggaggagcggagcccacagccactcagcacggccggcaaacac
cccaactggactaacaaacaggataacagagacttggagtcaacgcagagcttaaaccga
atggaattcattgtatag
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