Salvelinus namaycush (lake trout): 120065258
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Entry
120065258 CDS
T07522
Name
(RefSeq) tubulin alpha-1C chain
KO
K07374
tubulin alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04145
Phagosome
snh04210
Apoptosis
snh04530
Tight junction
snh04540
Gap junction
snh04814
Motor proteins
snh05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120065258
09143 Cell growth and death
04210 Apoptosis
120065258
09144 Cellular community - eukaryotes
04530 Tight junction
120065258
04540 Gap junction
120065258
09142 Cell motility
04814 Motor proteins
120065258
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120065258
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120065258
03036 Chromosome and associated proteins [BR:
snh03036
]
120065258
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120065258
04147 Exosome [BR:
snh04147
]
120065258
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
120065258
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
120065258
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
120065258
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120065258
Exosomal proteins of other body fluids (saliva and urine)
120065258
Exosomal proteins of colorectal cancer cells
120065258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
Motif
Other DBs
NCBI-GeneID:
120065258
NCBI-ProteinID:
XP_038872021
UniProt:
A0A8U1F8T7
LinkDB
All DBs
Position
Sna20:32242933..32247014
Genome browser
AA seq
449 aa
AA seq
DB search
MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGKMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRSGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNAILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPSYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVSEITNACFEPCN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSVEGEDEGEEY
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgagtgtatctccgtccacgtgggccaggctggcgtccagatcggcaatgcatgc
tgggagctgtactgtcttgagcatgggatccagcccgatggcaagatgcccagtgacaag
accattggaggaggagacgactccttcaacaccttcttcagtgagactggagctggcaag
cacgtccccagggctgtgtttgtggatctggagcccactgtcatcgatgaggtgcgttct
ggaacttaccgccagctcttccaccctgagcagctgatcactgggaaggaggatgcagct
aacaactacgcccgtgggcattacaccatcggcaaagagattattgacttggttctggac
aggatccgcaaactggctgaccagtgcactggcctccagggcttcctggtcttccacagc
ttcggaggtggcaccggttctggtttcacttccctgttgatggagcgcttgtctgttgac
tacggcaagaagtccaagcttgagttctccatttatccagctcctcaggtctccacagcc
gttgttgagccctacaacgccatcctgaccacccacaccaccctggagcactctgattgt
gctttcatggtagacaatgaggccatctatgatatctgccgtaggaaccttgatatcgag
cgtccctcctacactaatcttaacaggttgatcagtcagattgtgtcctccatcactgct
tccctccgattcgatggtgccctcaatgttgatctgacagagttccagaccaacttggtg
ccctacccccgtatccacttccccctggccacctatgccccagtgatctcggcagagaag
gcttaccatgagcagctgactgtttcagagatcacaaacgcctgttttgagccatgtaat
cagatggtgaaatgtgacccacgtcacggcaagtacatggcctgctgtctgctgtaccgt
ggcgacgttgtgcccaaagatgtcaatgctgccattgccaccatcaaaacaaaacgctcc
atccagtttgtagactggtgcccaactggtttcaaggttggtatcaactaccagccccca
actgtggtacctggtggagatctggccaaggtccagagggcagtgtgcatgcttagcaac
accactgcagtggcagaggcctgggcccgtcttgaccacaagtttgatctgatgtacgct
aagcgtgcttttgtgcactggtacgtaggtgagggtatggaggagggagagttctctgag
gccagggaggacatggctgccctagagaaagattatgaagaggtgggagcagatagcgtg
gagggagaggatgagggagaagaatactaa
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