Salvelinus namaycush (lake trout): 120065274
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Entry
120065274 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase DTX3L-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120065274
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120065274
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120065274
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120065274
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
KH_DTX3L
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-RING_10
HTH_DNAJC9
zf-C3HC4_4
zf-RING_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
120065274
NCBI-ProteinID:
XP_038872067
UniProt:
A0A8U1F8U9
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Position
Sna20:complement(33598614..33607237)
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AA seq
891 aa
AA seq
DB search
MAENDVDMVEVGDNNSDPALAASGAPHYPQWESPSPHGRGDRTYSSGTSWEPVIVTQPHS
CPTSHTQSTDLTDDKQKDLYLTDDESDKGLDTPPQGTDLYRSKEEMSLDPPAGGAAGSNK
DRQSQRDQHSPINSQRTQDVDLNQAKVEERKQPSASPDEATVYVTVKWPRKDLPPKWKST
LEKTLQSWLNKDFGDKTTDCTLKGLYYNGSWAEVKISPSTDLKVLLNRRATQMTFKDEAK
TTATVQFHKTAPSTPWNQSDCKPSSIDGSPPTSHTPQDVIGFAFVKLPVTVHTIIDLSGI
PHEAQVSLQTRFSQYRTYHSLTFTGNFEEGEKFYREVHKVIKEAEAGPAGDRNGLAVTPS
MTHKGMNTHEAPGQKEMRFPVPLTLFGYMNQAYQKEMEDIEKRNGVKINADVKVSIKEDS
AKTGRDFLLPEAYQELIDLFQKCAGDFDSISAHLPHMNLEDLQNTLKNIQNEESRLVLNV
SANSCNVFGPKQSMVAVGKAFGVGHSSTVKTFGMDHSSTDEAFGSGRRSTEIPQKIVLDI
KDPLVSSGLSMDPAHWELIKKIFDEKIKAIQNKFGVVFMNNPSQGKVRVTTRPIKSQHTA
SLECHAIRALMHLYQKVATSTMSCYLLDTTQAGTVGDMLEKIRSRHQCVGAGENYGPWRL
IGLPEHLGPAVKELEEKLGGHVFKEEDKQRIVYPEDFNTGAAEVGAAGEATCPICMDIFT
NKEKLSCTHEFCKECLRRSVETMGPSCPVCKDVYGKVEGDQPDGTMKHTISYTNLPGFTQ
CDTIVINYDIPDGKQTKKHPNPGKHFYGTKRMAYLPNNMEGNEVLKLLKKAFNQRLIFTV
GISRTTGAENVVTWNDIHHKTNIEGGAQNFGYPDHDYLRRVKDELKAKGIK
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcagaaaatgacgttgacatggtggaagtgggtgataataattctgacccagccttg
gctgccagtggagcaccgcactatccacaatgggagtctccgagcccccatgggagaggt
gataggacctattcttcaggaacaagttgggagccagtgatagtaacacagccacattca
tgtcctaccagtcacacccaaagtactgatttgactgatgataagcaaaaggacctgtat
ttgacagatgatgaatctgacaaaggactggatacaccaccccagggcacagatctgtat
cggtcaaaggaggagatgagtctggatcctcctgctggaggagctgctggctctaataaa
gacagacaatcacagagagatcagcattctcccatcaactcccaaaggactcaagatgtg
gatctgaatcaagctaaggttgaagagagaaagcagccatcagcatctccagatgaggct
acagtctacgtcactgtgaagtggcctaggaaagaccttccaccaaaatggaaatctaca
ctagagaaaactctccagtcatggctcaataaagactttggtgataagactacagattgt
accttgaaaggtctttattacaatgggtcatgggctgaggtcaagataagtccctcaaca
gatctaaaagtacttctgaatcggagggcaacacagatgaccttcaaagacgaggccaag
acaaccgctactgtgcagtttcacaaaactgcaccatctacaccctggaaccaatcagac
tgtaaacctagctcaatagatggctctcctccaacatcacacactccacaggatgtaatt
ggctttgcttttgtcaaactcccagtgactgtacatactatcattgatctcagtggcatc
ccacatgaagcacaggtttcccttcagaccaggttcagtcagtaccgcacttatcactca
ctgacctttactgggaactttgaggaaggggagaagttctacagagaggtgcacaaggtc
atcaaggaagctgaggctgggccagcaggtgataggaatggtttagcagtgacaccaagc
atgactcacaagggaatgaacacccatgaagcccctgggcaaaaggaaatgagatttcca
gtcccactgaccctctttgggtacatgaaccaggcctaccagaaggagatggaggacata
gagaaaagaaatggagtcaaaatcaatgcagatgtgaaggtgtccatcaaagaagattca
gcgaaaacaggtagagattttctgctgcccgaagcctaccaggagttaattgacctcttc
cagaagtgtgcaggtgattttgacagcatctccgcacatctgccacacatgaatctagaa
gacctccagaatacgctgaagaacatccagaatgaggagtccaggctggtgctgaacgtg
tccgccaacagttgcaatgtgtttgggccgaagcagagcatggtagcagtcgggaaggct
tttggggtgggccacagctccacagtgaagaccttcggaatggatcacagctccacagat
gaggcctttggatctggaaggagatctacagagattccacagaagattgtgcttgacatc
aaagacccactggtgtcaagtgggctgtccatggacccagcccactgggagctgattaaa
aaaatatttgatgaaaaaataaaagcaatccaaaataaatttggagtagttttcatgaat
aatccctctcaggggaaggtcagagtgacaaccagacctatcaagtcccaacacactgcc
tctctggaatgccacgccatcagagctctgatgcacctctaccagaaggttgccacgtca
acaatgagctgctacctgctagacactacccaggcagggactgtgggggatatgctggag
aagatccgctctcgacaccaatgtgttggggcaggagaaaactacggtccctggaggctg
attggcctaccggagcatttaggccctgctgtcaaagagcttgaagagaagctgggtggg
catgtgtttaaagaggaagacaagcagaggattgtgtatcctgaagacttcaacacagga
gcagctgaggtgggagcagctggagaagcgacatgccccatatgcatggatatatttacc
aacaaggagaagttgtcgtgcacccatgagttttgtaaagagtgtctgaggcggtcagtg
gaaaccatgggccccagctgtcctgtgtgtaaggatgtgtacgggaaggtggagggagac
cagcctgatggaacaatgaaacacactatttcttacaccaacctacctggattcactcaa
tgtgacacgatagttatcaactatgatattccagatggaaaacagacgaagaaacatccc
aaccctggaaagcacttctatgggaccaaaagaatggcttatctacccaataacatggag
gggaatgaggtcctgaagctgctgaagaaagcatttaatcagaggctgattttcacagtt
gggatctccagaaccactggggcagagaatgtagtgacctggaatgacattcaccacaaa
accaacatcgaaggaggggcacaaaatttcggctatcctgaccatgactacctgagaaga
gtgaaggatgagctgaaagccaaaggcatcaaatga
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