Salvelinus namaycush (lake trout): 120065279
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Entry
120065279 CDS
T07522
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120065279
Transcription factors [BR:
snh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
120065279
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Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
YabA
DUF5365
Oscp1
Motif
Other DBs
NCBI-GeneID:
120065279
NCBI-ProteinID:
XP_038872073
UniProt:
A0A8U1H6B9
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Position
Sna20:34127800..34131832
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AA seq
419 aa
AA seq
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MEMERIQRAQLPPKYQQAELSDMQGMDFPIYVYKSRRGMKRAEECKENYKLPHRLIEKKR
RDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTTLLENQQQKILALQNG
MQIEQSSPSQENSEEMFRSGFHVCAQEVLQYLAKQDGDGDLTPSHMINHLHKVVTEILQV
PPHSPWPEKTPSHHHAQREKPVGQPPKLSEGHRKNCVPVIQRAYAQVGGEQSGSDTDTDS
GYGGEQGEHLASRAGYYGQESQLKRALGEKTASLGVKQEDEPRHKHARVESSDDEFLSGG
ESSSSSSSSSSGHGSYMSAYSPHQAQPHPLCMPFYLIPPSAAAYLPMLEKCWYSGAMPMI
YPGLGGSAQGMPSDTHAQPSLITISPRGHSPSPLTVAQSPMDSPALLQVLKPINLETKD
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaaaggattcaaagggcgcaactccctcccaagtaccagcaggctgagctg
tctgacatgcaagggatggatttccctatatatgtatacaaatcccgtcggggaatgaaa
cgagcagaggagtgcaaggaaaactacaaactacctcatcgacttattgagaagaaaagg
cgagacaggataaacgagtgcatcgctcagttgaaagatttattgcctgagcacctgaaa
cttacaactcttggccatctggagaaggctgtggttttggagctcacgctcaagcatgtg
aaagccctcaccactctactggaaaaccagcagcagaaaatcctcgctctgcagaatggc
atgcaaatcgagcagtcctctcccagccaggagaacagtgaggagatgttccgctcaggc
ttccacgtctgtgcccaggaggttttacagtacctggccaagcaggacggtgacggagac
ctcacaccctcccacatgatcaaccacctgcacaaggtggtcactgagatcctccaggtc
cctccccacagcccctggcccgaaaagacccccagccaccaccacgcccagagggagaag
cctgtaggccagccccccaagctcagcgagggccacaggaagaactgtgtgcctgtcata
cagcgggcgtatgcccaggtgggcggtgagcaaagcggcagtgatacagacacagacagc
ggctacggtggcgagcagggtgagcatctggcatcgcgtgcagggtactacggccaagag
agccagctgaagagagcgctgggcgaaaagacggcatcattgggcgtcaagcaggaagat
gaacctcgccacaaacatgcccgggtggagtcatccgatgacgagtttctctcaggtgga
gagtcatcctcatcctcttcatcctcctccagcggtcacggcagctacatgagcgcctac
tccccccaccaggcccaacctcatcctctctgcatgcccttctacctcatccccccttct
gctgccgcttatctgcccatgctggagaagtgctggtactctggggccatgcccatgatc
taccctggcctggggggctccgcacagggcatgcctagcgacacgcatgcccaaccttcc
ctgattacgatatcccccagggggcactctccctctcccctcaccgtggcccagagcccc
atggactcaccagccctcctccaagtgttaaagcccattaacctggaaaccaaagactga
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