Salvelinus namaycush (lake trout): 120065343
Help
Entry
120065343 CDS
T07522
Name
(RefSeq) peroxisome proliferator-activated receptor delta-like isoform X1
KO
K04504
peroxisome proliferator-activated receptor delta
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03320
PPAR signaling pathway
snh04148
Efferocytosis
snh04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
120065343
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
120065343
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
120065343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120065343
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120065343
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
120065343
Nuclear receptors [BR:
snh03310
]
1. Thyroid hormone like
1C. Peroxisome proliferator-activated receptor (PPAR)
120065343
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
120065343
NCBI-ProteinID:
XP_038872190
UniProt:
A0A8U1H8F7
LinkDB
All DBs
Position
20:40201016..40247222
Genome browser
AA seq
540 aa
AA seq
DB search
MEGTRAAVLAPVKSKAPRRDRKRRVGALVRKGGVCRNGTTSPHGECTSDGARGLESSLEV
LKPSLLSKGLGERVGEKEGVRGAEVSPEREEGLGSWDMKSHDEEVVQQEQEDQQEKGSSN
NHSTSNTDSPALSSSCTDLSQTSSPSLSDQLLLGREDGTGAGINVECRICGDKASGFHYG
VHACEGCKGFFRRTIRMKLDYERCERSCKIQKKSRNKCQYCRFQKCLLLGMSHDAIRYGR
MPEAEKRKLVAGLLAGEKVPTTNPNGSDLKSLAKRVNNAYLKNLNMTKKKARSILTGKTS
SSPVAYPYPFVIHDMDSLCQAENGLVWKQLINGTTPNKEIGVHVFYRCQCTTVETVRELT
EFAKSIPGFVDLFLNDQVTLLKYGVHEAIFAMLPSLMNKDGLLVANGKGFVTREFLRSLR
RPFSEIMEPKFEFAVKFNALELDDSDLALFVAAIILCGDRPGLINIKQVEEIQDNILQAL
DQHLLANHTDSKYLFPKLLNKMADLRQLVTENAMLVQKIKKTESETSLHPLLQEIYKDMY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggagggcaccagggccgccgtcttagcgccggtcaaaagcaaagcccctcgacgggat
cggaagcggcgtgtcggggctttggtaaggaaagggggagtctgccggaacgggaccacc
tccccacatggggagtgcacatcggacggagcgagggggcttgagtcctccttggaggtg
ctaaaaccatccctgctgtcgaaggggctgggagagagagtgggggagaaggagggggtg
cgaggagcagaggtgtcacctgagagggaggagggccttggctcctgggacatgaagtct
catgacgaagaggttgtgcagcaggagcaagaggatcagcaggagaaggggagtagtaac
aaccacagcacctccaatacggacagccctgccctctccagtagctgcacagatctgtcc
cagacgtcgtctccatcgctgtcggaccaactcctcctgggtcgagaggatgggacgggg
gccgggatcaatgtggaatgtcgtatctgtggagacaaggcctcagggttccactatgga
gtacacgcctgtgagggttgcaaggggtttttccggcggaccatccgtatgaagctggac
tatgagcgctgtgagcgcagctgtaagatccagaagaagagcagaaacaagtgccagtac
tgccgcttccagaagtgcctgctgctgggcatgtcccatgacgcgatccggtatggccgc
atgccggaggcagagaagaggaagctggtggcgggcctcctggcgggagagaaagtcccg
accactaaccctaatggctcagatctcaaatccctggccaagcgagtcaacaacgcctat
ctgaagaacctcaacatgaccaagaagaaggctcgcagcatcctcaccggaaagaccagc
tccagcccagtagcgtatccatatccctttgtgattcacgacatggactccttgtgccag
gctgagaacgggctggtgtggaaacagctgatcaacggcacgacccccaacaaggagata
ggggtacacgtgttctaccgctgccagtgcaccacggtggagacggtcagggagctcact
gagttcgccaagagcatccccggcttcgtagacctcttcctcaacgaccaggtgacgctg
ctgaagtacggcgtccacgaggccatcttcgccatgctgccctcgctcatgaacaaggac
gggttgctggtggccaatggaaagggctttgtgacccgggagttcctgcgcagcctgcgg
cgccccttcagtgagatcatggagcccaagtttgagtttgcggtcaagttcaacgccctg
gagctggatgacagtgacctggccctgttcgtggccgccatcatcctctgtggagaccgt
ccggggctgataaacatcaagcaggtggaggagattcaggacaacatcctgcaggccctg
gaccagcacctgctggccaaccacactgactcaaagtaccttttccccaagctgctcaac
aagatggctgacctgcgccagctggtaactgagaacgccatgctggtccagaagatcaag
aagacagagtccgagacctcgctgcacccgctgctgcaggagatctacaaggacatgtac
tga
DBGET
integrated database retrieval system
