Salvelinus namaycush (lake trout): 120065345
Help
Entry
120065345 CDS
T07522
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48-like isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120065345
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120065345
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120065345
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120065345
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120065345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Motif
Other DBs
NCBI-GeneID:
120065345
NCBI-ProteinID:
XP_038872195
UniProt:
A0A8U1F980
LinkDB
All DBs
Position
Sna20:40330737..40351516
Genome browser
AA seq
1056 aa
AA seq
DB search
MARHAMAPRVQLQKAAWRWVESVRPEDIHREHIEIAYRICVPRCKRGACRRNCKGNPNCL
VGIGEHAWLGEINENSFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRR
TLYLCQNARAEEHNMDSDYEPRSICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQ
DAQEFSKLFLSLLEDTLSKQKNPNLQNVIQLQFCGQISYVTVCNQCGRASPLPSRYYELE
LNIQGHKNLTECVTEFLKEEKLDGDNRYFCESCQSKQNATRRIKLHSLPRVLNLQLMRFV
FDRQTGHKKKLNTFISFPEQLDMGPFLEGKEDETCVYELSAVLIHRGVSAYSGHYIAHVR
DARTSDWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQTRKPKCSKGYHCSRNAYMLVYK
CHREEDTDPMETNVDVPGFLQRLVDRDNRKFEEWCLEMADMRKQSVDKGKAKHEEVKELY
ELLPAEDGQQYEFVPLEWLKKWLDDSTVTKEIDNGNFLCSHGKLHPDKVGEAKRISVKAA
ELLFDRYGGGPRLDGSTLCEECVGQRCRVLRLKNQLAENYKEVTNLVKGPPKSDGGYWVG
KTSLRSWRQLALEQLDEDEEETKHIDGKTNGEGPEITDTKEYGPENQDEDEEEMKTFNED
ILCRHGGLNILESERRLVTEEVWSKLRVYFPRAPQFTQLQEPCQQCLRLEREGKENEALN
RMMASEQKSSLLNLFQEKNRPTLTKWPQETDILYIVPLFFVDEWRKFIRRPTKTTPVSSV
GNSLLLCPHGGFMFTHDSMLMGDAQHIALLWPGEWEVISRQFLVDQPISICRISQATPNG
SSVEYTTHPELCRDCREGFIFQQQRDMREYAQATVYVRKVIDDKRIMEAAPEVNVSGSEA
EDEREEPVTKVDGERDPDFSQIEDGAKRQRLSDGTIGAAVSPSPMASGGKSGIRRSTRHR
KLRGEKALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGRCLTDDSATLGSLGVIPESV
ICLKADEPIADYAALDDVYQVCMPEEGFKGTGLLGH
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcatgcaatggcgcctcgcgtacagcttcagaaagcagcctggcgctgggtc
gagtcggtgagaccggaggacatacaccgggaacatattgagatagcttaccgaatctgt
gtaccgcggtgcaagaggggagcatgcaggagaaattgtaaagggaacccaaattgtctt
gtcggtattggagaacatgcctggttgggagagatcaacgaaaacagcttccacaacatt
gatgatccaaattcagagcgccgggacaagaacacgtttgtgggtctgacgaacctgggc
gccacgtgttacgtcaacaccttcctgcaggtgtggttccacaacctggagctgcgcagg
accctgtacctgtgtcagaatgcccgggcagaggagcacaacatggactcagactacgag
cctcgcagcatatgtgaacacctgcagtacctgtttgcactgcttcagaacagcaacaga
aggtacattgacccctcggggctggtcaaggcgctagggctggacacaggacaacagcag
gacgctcaagagttctccaagctcttcctttcgctattggaggacacattatccaaacag
aagaacccaaacctgcagaatgtcattcagctgcaattctgtggacagatttcttacgtc
actgtgtgtaaccagtgtggccgcgcttctcccctgccgtcccgatactacgaactggag
ctcaacatccagggccacaagaaccttacagaatgtgtcacagagtttctcaaggaggag
aagctggacggtgacaaccgctacttctgtgagagctgccagagcaaacagaacgccact
cgacgcatcaaactgcacagcctcccacgcgtactaaacctgcagctcatgcgttttgtc
ttcgacagacaaacgggtcacaagaagaagctcaacaccttcatcagttttccagagcag
ctggacatgggcccatttctggagggaaaagaagatgagacgtgtgtgtacgagctgagt
gcggtcctgatccaccgcggggtcagcgcttactctggtcactacattgcacacgtgcga
gacgcccgcaccagcgactggtacaagttcaacgacgaggagattgagaagatggagggc
aagaagctacaactgggcatcgaggaggacatcgccgagacggtgaagtcccagacccgt
aagcccaagtgcagtaaaggataccactgctccaggaacgcctacatgctggtgtacaag
tgccatagagaggaggacactgaccccatggagaccaacgttgacgtgccaggctttctg
cagaggctggtggaccgagacaacaggaagtttgaggagtggtgcctggagatggccgac
atgcgcaagcagagcgtcgacaagggcaaggccaagcacgaagaggtgaaggaactctac
gagcttttacctgcggaagacggccagcagtatgagtttgtgcctctggagtggttgaag
aaatggctggacgactcgacggtcactaaagaaatcgacaacggcaacttcctgtgttct
cacggtaaacttcacccagacaaggtgggggaggccaagaggatctctgttaaagcagca
gagcttctctttgacagatacggcggaggacccagactagatgggtcaactctctgtgag
gaatgtgtgggccagagatgcagggtgctgcggctaaagaaccagctggccgagaactac
aaagaagtcaccaaccttgtcaagggcccgcccaaaagtgatggggggtactgggtgggc
aagacgtctcttcggagctggagacagctggccttggagcagctggatgaggacgaggag
gagaccaaacacatcgacggcaaaaccaacggagagggaccagagatcactgatactaaa
gagtacggcccagagaaccaggatgaagacgaggaggagatgaagaccttcaacgaggac
atcctctgtcggcatggtggtctgaatatccttgagagcgagaggcggctggtgacggag
gaggtgtggtccaaactgagggtgtatttccccagagccccccagttcacccagctacag
gagccctgtcagcagtgcctgaggctggagcgtgaggggaaggagaatgaggctctgaac
aggatgatggcatcagaacagaagagctccctcctcaacctgttccaggagaagaacaga
cccacactaaccaagtggccacaggagacggacattctttacatagttcctctgtttttt
gtggacgagtggagaaagttcatcaggaggcccactaagaccaccccagtgtctagcgtg
gggaacagtttgctcctttgtccccatggaggcttcatgttcacccatgactccatgttg
atgggagacgcccaacatatagctcttctctggcccggtgaatgggaggtgatcagcaga
caattcctggttgatcagccaatctccatctgccggatcagtcaggccacacccaacggc
tccagtgtggagtacaccacccatcctgagctttgtagggactgcagagaaggcttcatc
ttccagcaacagagggacatgagagagtacgcacaagccacagtctacgtccgcaaggtc
atagacgacaagaggataatggaggcagctcctgaggtgaatgtgagtgggtcagaggca
gaggatgagagggaggagcctgttactaaggtggatggagagcgagaccctgactttagc
cagatagaggacggggcgaagcgtcagaggctgagtgacggcaccatcggtgctgccgta
agtccgtcccccatggccagtggcggcaaatcaggtatcaggaggagcacaaggcacagg
aagctccggggagagaaagcactcatcgtctcagccaatcagacgctcaaggagctcaaa
atacaaatcatgcatgccttctctgtggccccgtttgatcagaacctgtcgatcgacggc
cggtgtctaacggacgactctgccaccctcggcagcctaggagtcatcccagagagcgtc
atctgtctgaaggctgatgaacccatagcagattatgcagcattggatgatgtttatcag
gtctgtatgcctgaagaaggatttaaaggcactgggcttctcggtcactga
DBGET
integrated database retrieval system
