Salvelinus namaycush (lake trout): 120065387
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Entry
120065387 CDS
T07522
Name
(RefSeq) WD repeat-containing protein 1-like
KO
K24736
WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120065387
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
120065387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
eIF2A
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
PEP5_VPS11_N
WDR90_beta-prop_4th
RMC1_N
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
NBCH_WD40
PROPPIN
Beta-prop_ELP1_1st
Beta-prop_WDR11_1st
WD40_RFWD3
DUF7165
DUF5711
Beta-prop_DCAF12
HPS3_N
PQQ
Motif
Other DBs
NCBI-GeneID:
120065387
NCBI-ProteinID:
XP_038872291
UniProt:
A0A8U1F9B1
LinkDB
All DBs
Position
Sna20:42558922..42579844
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AA seq
606 aa
AA seq
DB search
MTYELKHVFASLPQMERGVAKVLGGDPKGNNFLYTNGKSVIIRNIDNPAIADIYTEHPHQ
VTVAKYAPSGFYIASGDVSGKIRIWDTTQKEHLLKYEYQPFGGKIKDIAWTEDSKRIACV
GEGREKFGAVFLWDTGSSVGEISGHSKIINSVDIKQTRPYRLITGSDDNCGAFFEGPPFK
FKFSSTDHSRFVNCVRFSPDGNRFCTAGADGQIFLYDGKTGEKLGALGGAKAHEGGVYAV
SWSPDSSQLISASGDKTVKLWDVGTSMALTTFNIGTDVMDQQLGCLWQKDHLLSISLSGY
INYLDKSNPDRPLRTIKGHSKSIQSLTVHKNKGRAYIYSGSHDGHINYWDAETGENDCFS
GKGHSNLVTKMAVDEADQLVTCSMDDTVRFTSVTKKEYSASNLVKMDVQPKHVSVATGGL
TLAVCIGQVVLLKNQKKVFTLDSLDYEPEAGAIHPGGSTAAVGGADGKVRLYSVQGNTLK
DDGKSMEAKGPVTDMAYSKDGAYLAVTDEKKVVTVFTVADDYSVKNDFYGHHAKVVTLAW
SPDNEHFASGGMDMMVYVWTVNDADKRLKIPDAHRLHHVSGLAWIDEHTLVTTSHDASIK
QWTLKF
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgacctatgaattgaagcatgtatttgccagcctcccgcagatggaacgaggagttgcc
aaagtccttggtggagatcccaaaggcaacaacttcctctacaccaatgggaagagtgtc
atcatcaggaacatagataaccctgccatagctgacatctacaccgagcaccctcatcaa
gttactgttgccaagtacgctcccagtggcttctacattgcgtctggagatgtgtctggt
aagatccgtatctgggacactacccagaaggagcaccttctgaagtacgagtaccagcct
tttgggggcaaaatcaaggacatcgcctggactgaggacagcaaaaggattgcttgtgtg
ggagagggacgtgagaagtttggggctgtgttcctgtgggacactggctcctcagtgggc
gagatctcgggccactccaaaatcatcaacagcgtggacataaagcagactcgcccctac
cgcctcatcaccggcagtgatgacaactgtggggccttctttgagggaccccctttcaag
ttcaagttctcaagcacagaccacagccggtttgtcaactgcgtgcgtttctctccagac
gggaaccgcttctgtacagctggcgctgatggtcagatcttcctatacgacggaaagact
ggcgagaagcttggggctctgggcggagcgaaggcccacgaaggaggagtctatgccgtg
agctggagccctgacagctcccagctcatctctgcctcgggtgacaagactgtgaagctg
tgggatgtgggcaccagcatggccctcaccaccttcaacattggcaccgacgtcatggac
cagcagctgggctgcctgtggcagaaggaccatctgctcagcatatccctgtcgggctac
atcaactacctggataagagcaaccccgaccggccgctccgcaccatcaagggtcacagc
aaatccattcagtccttgacagttcacaaaaacaaggggcgggcttacatctactctggc
agccatgacgggcacatcaattactgggatgcggagaccggggagaacgactgcttctca
gggaagggccacagcaaccttgtcaccaagatggcggtggacgaggccgaccagctggtg
acctgcagcatggatgacacggtccgcttcaccagcgtgacaaagaaagaatacagtgct
tccaacctggtaaagatggacgtccagcctaaacatgtttccgtagcaacaggggggctc
acattggccgtgtgcattggacaggtggtgttgctgaagaaccagaagaaggtgttcacg
ctggacagtctggactacgagcctgaagcaggagccatccacccagggggcagtactgcg
gcagtgggcggggcagatgggaaggtccgcttgtattctgtccaaggcaacactctgaag
gatgatgggaagagcatggaggccaaagggccagtcacagacatggcctactcaaaagac
ggagcctacctggccgtcactgacgagaagaaggtcgtcacagttttcaccgtggcggat
gattactcggtcaaaaatgatttttatggacaccacgctaaagtagttaccttggcctgg
tcccccgacaatgagcactttgccagcggtggaatggacatgatggtctacgtttggaca
gtgaatgatgcagacaagaggctgaagatcccagacgcccacaggttgcaccatgtcagt
ggcctggcctggatagatgagcacacgctagtgactacctcccatgatgccagcatcaag
cagtggactctaaaattctga
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