Salvelinus namaycush (lake trout): 120065438
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Entry
120065438 CDS
T07522
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4-like isoform X1
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120065438
04082 Neuroactive ligand signaling
120065438
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120065438
Ion channels [BR:
snh04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120065438
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
120065438
NCBI-ProteinID:
XP_038872374
UniProt:
A0A8U1FAI9
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Position
Sna20:complement(46988240..46996482)
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AA seq
578 aa
AA seq
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MSRCIPSSTTFILFVFSQNQDEKNQMMITNVWVKQEWNDYKLCWNPKEYENVTSMHIPSQ
LIWRPDIVLYNNADGDFSVTHLTKAHLFHDGRIKWVPPAIYKSSCSIDVTFFPFDQQNCT
MKFGSWTYDRTKIDLISMAGNVDQMDYWESGEWVLVDAVGNYNIKKYECCHEVYSDITYS
FIIRRLPLFYTINLIVPCLLISCLTVLVFYLPSDCGEKITLCISVLLSLTVFLLLITEII
PSTSLVISLIGEYLLFTMIFVTLSISITIFVLNVHHRSPRTDTMPRWVRRVFLDIVPGFL
FIRRPAVVKDNSKRLAEAMQKRATLWGELEAELEASFPPTSPLEVQEILARSPSLSMGRP
VEGSLPPKLPQQQQQPLDRSSSQYSILPEEPTTSSQPGCSPLFLHPLFPPRDKHHVARPK
MRSLSLQYGLGESEQPQTSVRCRSRSIQYCCLHEEVSSMGNGRQRPLSQHPSLMEERKQS
CSAACKYHSGLAKEAKAMTKDQRLLVLSPSMKMAMEGVQYIADHLRLEDIDFSVKQEWKY
VAMVLDRIFLWLFILVCLLGTLGLFVPPWLAGMIDLSV
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggtgcataccatcatcaaccacctttatactgtttgtcttttctcaaaatcag
gatgagaaaaatcaaatgatgatcaccaatgtctgggtgaaacaagagtggaatgactac
aagctctgctggaatccaaaggaatatgagaatgtcacctccatgcacatcccatcccag
ctaatctggagaccagatatagttctttacaacaatgcagatggtgatttctccgtgacc
cacctgaccaaggcccacctgttccacgacggacgcatcaagtgggttcccccggccatc
tacaagtcctcctgcagcatcgacgtcaccttcttccctttcgaccagcagaactgcacc
atgaagtttggctcgtggacctacgaccgcaccaagatcgacctaatcagcatggcgggc
aatgtggatcagatggactactgggaaagcggcgagtgggtgctggtggacgccgtgggc
aactacaacatcaagaagtacgagtgctgccacgaggtctactctgacatcacctattcc
ttcatcatccggaggctaccgctgttctacaccattaatctgatagtgccctgtctgctg
atctcctgtttgactgtcctggtgttctatctgccctctgactgtggagagaagatcacc
ctgtgtatctctgtgttgctgtctctcactgtcttcctcttgcttattaccgagatcatc
ccatccacctcgctggtcatctctctcatcggggagtacctcctcttcaccatgatcttc
gtcaccctttccatcagcatcaccatcttcgtgctcaacgtgcaccaccgctcgccgcgc
acagacaccatgccccgctgggtgcgccgcgtcttcctggacatcgtccccggcttcctg
ttcatccggcggcctgccgtggtcaaggacaacagcaagaggctggcggaggccatgcaa
aagagggctacgctatggggtgagctggaggctgagctggaggccagcttcccacccacc
tcccccctggaggtccaggagatcctggcccgctccccttctctctccatgggccgaccc
gtagagggttccctgccccccaagcttccccagcaacagcagcagcccctggacaggtcc
tccagccagtactccatcctcccggaggagccgaccacctcgtcccagccaggctgctct
cctctgttcctccaccctctcttcccgcccagggacaagcaccatgtggccaggcccaag
atgcgctccctcagcttacagtacggcctgggtgagagtgagcagccccagaccagcgtc
cgctgtcgctcgcgcagcatccagtactgctgcctgcatgaggaggtctcctccatgggt
aacggcaggcagcggcctctctcacagcacccgtccctgatggaggagaggaagcagagc
tgctcagctgcctgcaagtatcactcaggcctggccaaggaagccaaagcaatgaccaag
gaccagcggctcctcgtcttatccccgtccatgaagatggccatggaaggtgtgcagtac
atcgcagaccacctccgtttggaggatatcgacttctctgtaaagcaggagtggaagtac
gtggctatggtcctagaccggatctttctgtggttgttcatcttggtgtgtctcctgggg
accctcggactcttcgtcccgccctggctggctggaatgatagacctatctgtctga
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