Salvelinus namaycush (lake trout): 120065535
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Entry
120065535 CDS
T07522
Name
(RefSeq) PR domain zinc finger protein 2-like
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00310
Lysine degradation
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
120065535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120065535
03036 Chromosome and associated proteins [BR:
snh03036
]
120065535
Enzymes [BR:
snh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
120065535
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
120065535
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
120065535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_6
zf-C2HE
zf-C2HC_2
zf-C2H2_11
zf-C2H2_jaz
zf-H2C2_2
Motif
Other DBs
NCBI-GeneID:
120065535
NCBI-ProteinID:
XP_038872533
UniProt:
A0A8U1FAU8
LinkDB
All DBs
Position
Sna20:complement(579875..597392)
Genome browser
AA seq
1761 aa
AA seq
DB search
MAVPGGTMETLADIPHHVWKSLPDGLRLSPSAVDQSRIGVWASRPIPKGKRFGPFVGEKK
KRSQVSSNVYMWEAYFPARGWMCVDATDPMKGNWQRYVNWANSTQEQNLFPMEINRAIYY
KVLRPIGPGDELLVWYNGEDNPEITAALEEERGSSLSKKNSPRAKRARRKLLEGARQAGL
GAFRGPRQTGVTKPIVREMWDTEEGPIEEDERLSPSPGPSKGTRESSPMGRNGLSQAHFI
SAAMRGEAEEDDEEEDPGHLQQPLSLTQQSAQSATEAEPEERSEQPDLPLSHSSPVEEGP
GSLQHDTETASSLPRAEPEADPDPDPDLEGDPHGEESHPCQHCERHFSTKQGLERHTHIH
ATANQQTHTFKCRYCGKSFGSQVGRRRHERRHENGPKNKGQRPGSLAGTATLLTPLGQAG
GSSPDCGTVSGHYVVRGSPVPGGPMGILEVVRKDPAAESDRPFIVDENGETKELHPCKYC
NKAFGTHTNMRRHQRRIHERHLLPKGVRRKGMLLQESPSQQQLHHLPEQSPRVSPPLVYV
PSADTEDEGDREEYMVDISNNISENLSLYIDGKILSASSVSGCEVIEVDSSSAALFGLDA
VVISASQISQALKVDARTCAVRQVSNLGQPMSKRRTSTPPLMPSLKMESETGSSSASSSS
STSSSSALLVGSVFPQSSDSLAFQKEKTIYLSPKLKQLLQTQTDSQKPAIALMAERHRLA
PPLSVTSLPAASGRFKRRTASPSSSPQLSPALKANGCKNEAGVSSYTLKVPNLETLGMSP
AWSLSSKEERDTLSPSGKNGCSWSASRTGGNSCNQQPLDLSSGISKRRDSFNKTPGEVVL
DLSMSRKSTAESKGSPSPAQPPTKKKKPNTSMLEKVLMNEYAGLNPAEEEGSSPLGSPDS
QYTAGSGTGTASHSPSSNLPSESVHPSPPSLTPVTMNPSSPCGSSLTSPTPPPPVLPTMP
SPDCPTLSSLPVLSHKMSPRSIDQGEDEPVCVSNSTTAETMLAAVSNSYGDEEHINKPID
SNPDPLTREAISSPSTEPSLVSDAVALSLSSTQSKPARSGNQSLLDVQVNQDLEPIITEG
QEKSQCSELPVLSSVTESLLSALSTSPAAISDIPAPPAVSPPSLSSTVIKVEPQHSDQLA
DLVLSPCGTGSSPLSAAADKPSSLSEEEEEGSPPEPFSKSFVCNVCEDPFRSIKELSRHI
LEHAAEWPYKCEFCVQLFGNAPALLEHRTALHGVGRIFVCSVCSKEFAFLCNLQQHQKDL
HPSQPCTHTAVENGKPRPQNYTDPARAKEESNTSSTVATGPESSPEAASSQGVSDVKEEQ
PDTNGKHEEDGLEDPTEELYTTIKIMASEGGKPKGPDVRLGINQHYPSFKPPPFPYHNRT
AAGSVASATNFTTHNIPQTFSTAIRCTKCGKSFDNMPELHKHILACANASDKRRYTPKKN
PIPLRQIVKPQNGSLSPASAANAGHNAFRIMGQPKRLNFNQELPGKTKMSSLSKKKNQLV
QKAIAQRNETVATVKAPSQVKEEEPQEQEVHVCPHCSREFTYPASLSKHIAGSCPMKPVS
KKAKRGAATEATPAVDINMSLRRRTTDSEIQQPEPAEPVPKTLSKTRARNSGPGPAEAEA
PPPVGKGKMAATQVCTKRPASFPAATVSLSKKSKKGKVQSLPPTPLPSESPSDSSPRPAA
QTKQRMGKEVPPKKGAEVKSPPQQQSQVPPKKERFSLRARERAVGPVTRSLQIANTAAPV
EVKTEDLSSQEPEQTQEYLLK
NT seq
5286 nt
NT seq
+upstream
nt +downstream
nt
atggctgttcctggagggacaatggaaacgcttgctgacattccacaccatgtgtggaag
agcttgcccgatggcctgagactaagcccctctgctgttgatcaaagtcgtattggtgtc
tgggcctctaggccgattcctaaaggcaagaggttcggcccttttgtaggagagaagaaa
aagaggtcccaggtgtccagcaatgtttacatgtgggaggcgtattttccagccaggggc
tggatgtgtgtggatgccacagaccccatgaaggggaactggcaacggtatgtaaactgg
gctaactccactcaagaacagaaccttttccccatggagataaaccgagccatttactac
aaagtgttacggccaattgggccaggggatgagctgctggtgtggtacaatggggaagac
aaccctgagataacagctgcattagaggaagaaagaggcagcagtctgagcaagaaaaat
tcacccagggcaaagcgagccagaagaaagctgttggagggagccagacaggctggtttg
ggtgcattccgtgggcccaggcaaacaggcgtaaccaaacctattgtcagagagatgtgg
gacacagaggaaggtccaattgaggaagatgagagactctccccatcaccagggccttcc
aaggggactcgggagagctcccccatggggaggaacggcctctctcaagcccatttcatc
tcagcagcaatgagaggggaagcggaggaggatgatgaagaggaagacccagggcatctg
cagcagccgctgtcgctgacacagcagagtgctcagtctgctactgaagctgagccagag
gagaggagtgagcagcctgatctgccactaagccatagcagcccagttgaggaggggcct
gggagccttcagcatgacactgagactgcctcatccttaccaagggctgaaccagaggca
gaccctgaccctgaccctgacctggaaggtgacccccacggagaggagtcccatccctgc
cagcactgcgagcgccatttctccaccaaacagggcctggagcgccacacacacatccat
gccaccgcaaaccagcaaacgcacacattcaaatgccgttattgtggcaagtccttcggc
tcgcaggtggggcggcggcggcacgagcggaggcatgagaacgggccaaaaaacaaaggc
caaaggcctggctcactagctgggactgctactttactcactcctctggggcaggctggt
ggttcgagcccagactgtggcactgtctctggccactatgttgtcaggggctcccctgtc
cctggaggacctatggggatccttgaggttgtgaggaaggaccctgcggctgagagtgat
cggccgtttatcgtggatgagaatggagagacaaaggagcttcatccttgcaagtactgt
aataaggctttcggcactcacaccaacatgcgcagacaccagcgcagaatccacgagcgc
cacttactgcccaagggtgtccgcaggaaaggcatgctgctgcaggagagcccatctcag
cagcagctgcatcacctgcctgaacagtcccctcgtgtcagcccacccctcgtctatgtg
cccagtgcagacactgaggatgagggggaccgagaggagtacatggtcgacatatccaat
aacatctcagagaatctcagcctgtacatcgacggcaagatcctgtccgctagttcagtc
agcggctgtgaggtgatcgaagtggactccagttctgcagcactgtttggtctcgacgca
gtggtcatcagcgccagtcagatcagtcaggctctcaaagtggatgccaggacatgtgct
gtgaggcaggtctcgaatctcggccagcccatgtcgaaaaggagaacgtcgacacccccg
ctcatgccaagtcttaaaatggagtctgaaactgggtcctcttccgcctcctcttcctcc
tccacgtcttcctcatccgccttgttggtgggaagtgtcttccctcagtcctcagactca
ttagcatttcaaaaggagaaaacgatctatctgtctcctaagctcaaacagctcctccag
actcagacagacagtcagaaacctgccatcgccctgatggcagagaggcacagattagct
ccccctctctccgttacgtctctacctgcagcctcaggcaggttcaagagaagaacagct
tccccctcctcatctccacagctcagccctgcgctgaaagcaaacggctgtaagaacgag
gctggggtctcgtcgtacaccctcaaggtgccaaatctggagaccctgggcatgtcccct
gcctggagtctgtccagcaaggaggagagggacacactgagtcccagcgggaagaacggg
tgcagctggtctgcctctcggaccggagggaactcgtgtaatcagcagcccttggatctg
tccagcggcatcagtaagaggagggacagcttcaacaagactcccggggaggtagtgctg
gatttaagcatgagtcggaagagtacagcagagtctaagggaagtccatctccggcacag
ccccccaccaagaagaagaagcccaacaccagcatgctagagaaggtgttgatgaacgag
tatgccggcttaaacccagcagaagaggaaggctcttctcccctgggaagcccagattct
cagtatactgcaggcagtggtacaggcaccgcttctcacagtccctcttccaatctgccc
tctgaatcagtccatccctctcccccctctctaacgcccgtcacgatgaacccctcctcc
ccttgcggctccagcctgacctctccaacgccacctccccctgtcctacccaccatgccc
tcaccagactgccctacgctcagctctctccctgtcctctcccacaaaatgtcccccaga
tctatcgaccaaggtgaggacgagccagtttgcgtatcgaactctaccacagcagagaca
atgttagctgcagtaagtaacagttatggagatgaggaacatatcaataagccaatagac
tccaatccagatcctcttaccagggaagctatttcaagcccctctacggagccctccttg
gtatctgatgctgtcgctctgagtctgtcctcaacacaatcgaaacctgctaggagtggg
aaccaaagtttgctggatgtccaagtgaatcaagacctggaaccgattattactgaggga
caggagaaatcccaatgctctgaactccctgtattatcatccgtaacagaatccctcctc
tctgccttgtcgacctcgcctgctgccatatcggatatcccagctccaccagcggtctcc
ccgccatctctctctagcactgtgattaaagtggagccccagcacagtgatcagctggct
gacttagtcctttctccttgtggcacagggtcttcacctctgtctgctgctgctgacaaa
ccctcgtcgttgtcggaggaggaggaagagggatcgccgccagagcccttcagtaagagc
tttgtgtgtaatgtatgtgaggaccccttccgctccatcaaagagctcagtcggcacatc
ctagagcacgccgctgagtggccctacaagtgtgagttctgcgtgcagctgttcgggaac
gcccctgctctgctggagcaccgcacggctctccacggcgtgggacgcatctttgtctgc
tccgtctgctccaaggagtttgccttcctctgcaacctccagcagcaccagaaggacctg
catcccagccagccgtgcactcacactgcggtggagaacggcaagcccaggccacagaac
tacacagacccagccagggccaaagaggagagtaacacctcctcaaccgtagccacaggg
cctgagtcctctcctgaagctgcttcctcccagggggtctctgatgtgaaggaggagcag
cctgatactaacgggaagcatgaggaggatggactggaggacccaactgaagagctgtac
actactataaagatcatggcttctgagggaggcaagcctaaaggcccagacgtacgcctg
ggcattaatcaacactaccccagtttcaagccaccccccttcccctaccacaaccgcacc
gctgcaggctcggtggcctcggccaccaacttcactacccacaacatcccccagacattc
agcactgccatccgctgcaccaaatgcggcaagagtttcgacaacatgcccgagctgcac
aagcacatactagcctgtgccaacgccagtgataagaggcggtacactcccaagaagaac
cccatccctctcagacagatagtgaagccccagaacggctctctgtcgcctgcctctgct
gccaacgcagggcacaacgccttccgcataatgggccaacccaagaggctcaacttcaac
caagaactgcctggcaaaaccaagatgagttccctcagtaagaagaagaaccagctggtt
cagaaggccatcgctcagaggaatgagactgtagctactgttaaggcccctagccaggtt
aaagaggaggagccgcaagagcaggaggtccacgtatgccctcactgcagcagagagttc
acctaccctgccagcctcagtaaacatatagcaggcagctgtcccatgaagccggtctct
aaaaaggccaaaaggggagccgcaacagaggcaacaccagctgtagacataaacatgagc
cttcgacggagaaccacagactctgagatccagcagccagagccggctgagccggttccc
aaaacacttagcaaaactcgggctcgcaactctggacctggccctgcggaggctgaggcc
ccaccaccggtgggtaaaggaaagatggctgccacacaggtgtgcaccaagaggccagcc
tctttcccagctgccacagtttctctcagcaagaaaagtaaaaaaggcaaagttcaatcg
ttaccccccaccccgttgccctccgagagtcccagtgactcttcgccgcggccagcagct
cagacaaagcaacgcatgggcaaggaagtgccacccaagaagggagcggaggtgaaatcg
cccccacagcagcagtctcaggtgccgcctaagaaagaacggttctctctgagagcgagg
gagagagctgttgggccggtgactcggagcctgcagatagccaacactgcagctcctgtg
gaggtgaaaacagaggacctctccagccaggagcctgaacagacccaggagtacttgctg
aaatga
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integrated database retrieval system
