Salvelinus namaycush (lake trout): 120065555
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Entry
120065555 CDS
T07522
Name
(RefSeq) growth/differentiation factor 5-like
KO
K04664
growth differentiation factor 5
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04060
Cytokine-cytokine receptor interaction
snh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120065555
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120065555
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
snh04052
]
120065555
Cytokines and neuropeptides [BR:
snh04052
]
Cytokines
Transforming growth factors (RSTK binding)
120065555
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Motif
Pfam:
TGF_beta
Motif
Other DBs
NCBI-GeneID:
120065555
NCBI-ProteinID:
XP_038872548
UniProt:
A0A8U1FAV9
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Position
Sna20:3570249..3573182
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AA seq
538 aa
AA seq
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MKVLKSVPLLLGCWTLLYLDFIPASLSHTGIAECAPESGGKEHTGGAGEGANPGIGSTAR
STVGNYGAGGWKSLSAARITRIRTGPPLIKGEAAKAKAVTLVSSPHSVTVSRARGAVNLG
PKEAVRYWAPGGDATKAAAAPVPVALSMQTGKGSGRPGQSKGNTVPRAATSARTGQQKVV
DVQKHIARLAQMSGKATGKLNGRYSPKLLLVTPHDYMLSLYWSLSTGGVNTSVLHEAGMA
NTITSFVDKGQDARIPQLRRQKYYFNISSLEKEGLLGAELHILRKRLADPHKALSTDRVF
CLKLFTCVAGKQKATLLQTQTIKDHNSPKWEVFDIWKLFKNFKNTVQLCFELEGLERGSP
VDLRALGFSRPGRQTKEKAFFLMFGRTKKNDLFYNEIKARSGHDNKTVYEYLFTQRRMRR
APTNRGKKLAKNPKPRCHRKQLHVNFKEMGWDDWIIAPLEYEAYHCDGVCDFPIRSHLEP
TNHAIIQTLMNSMDPDSTPPTCCVPTRLSPISILYIDSANNVVYKQYEDMVVESCGCR
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtactgaaaagtgtccctcttttattggggtgttggactctcttatacctggac
tttatcccagcgtcactgagccataccggcattgcagagtgcgcacccgagagcggaggc
aaggagcacacaggcggagcaggtgaaggagccaacccgggaattggctcaactgccagg
tcgacggtaggaaactacggcgcagggggttggaagtctctaagtgctgcgaggatcacg
cgcattagaacaggacccccgctgataaagggcgaggcagccaaagcgaaagctgtgaca
ttagtgtcatcaccgcacagcgtaacggtcagccgtgctcgcggagctgtcaatttgggg
cccaaggaggctgtgcgctattgggcacccggcggggatgctactaaagcagcagctgcg
cctgttcccgtggcgttgagcatgcaaacaggcaaaggctcaggcaggcctggacagagc
aaaggaaacactgtccccagagctgcaacatcagcacgaactggacaacaaaaggtcgtt
gatgtgcaaaagcacattgctcggttggcccaaatgagtggcaaagcaacgggcaaactt
aacggcagatactctccaaagctcctattggtaactccgcatgactacatgttgtcactg
tattggtcactatccacaggaggggtgaacactagtgtactgcacgaggctggcatggcc
aacaccatcacaagctttgtggataaaggacaagatgcccgtattccccagctgagaaga
cagaagtattacttcaacatcagttccctggagaaggaggggttactgggtgccgagctg
catatactcaggaaaagactggctgatccacacaaagcactttccactgacagagttttc
tgcctgaagctgttcacttgtgtagcaggtaagcagaaagctacactgctccaaactcaa
accatcaaggaccacaattcgcccaaatgggaagtgtttgacatttggaaactattcaag
aatttcaagaacaccgtccagctttgctttgagctggagggtttagaacggggaagcccc
gtggacctcagggcactgggcttcagtcgtccgggcaggcaaaccaaagagaaggccttt
ttcctcatgttcgggcgcaccaagaaaaatgacttgttctacaacgagatcaaagctcgg
tcgggccacgacaacaagacggtgtacgaatacctgttcactcagcggcgcatgcgccga
gctccaaccaaccgcggcaagaagctagccaagaaccccaagcctcgttgccacaggaag
cagctgcacgtcaacttcaaggagatgggctgggacgattggatcatcgccccactagag
tatgaggcctaccactgcgacggggtatgtgacttccctattcgctcgcacctcgagccc
accaaccacgccatcatccagacgctcatgaactccatggaccccgactcgactccgccc
acctgctgcgtgcccactcgcctcagcccaatcagcatcctctacattgactcggccaat
aacgtggtctacaaacagtatgaggacatggtggtggagtcctgtggctgcaggtag
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